PMC:7205724 / 1441-1769
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
51 | 69-72 | Gene | denotes | IL6 | Gene:3569 |
52 | 126-129 | Gene | denotes | IL6 | Gene:3569 |
60 | 2-10 | Species | denotes | patients | Tax:9606 |
61 | 107-115 | Species | denotes | patients | Tax:9606 |
62 | 170-179 | Species | denotes | SARS-CoV2 | Tax:2697049 |
63 | 231-240 | Species | denotes | SARS-CoV2 | Tax:2697049 |
64 | 26-37 | Chemical | denotes | Tocilizumab | MESH:C502936 |
76 | 16-24 | Disease | denotes | COVID-19 | MESH:C000657245 |
77 | 303-311 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T5 | 52-60 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T6 | 180-184 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T7 | 255-268 | Body_part | denotes | immune system | http://purl.org/sig/ont/fma/fma9825 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 255-268 | Body_part | denotes | immune system | http://purl.obolibrary.org/obo/UBERON_0002405 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T17 | 16-24 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T18 | 170-174 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T19 | 231-235 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T20 | 303-311 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 39-40 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T6 | 180-184 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T7 | 255-268 | http://purl.obolibrary.org/obo/UBERON_0002405 | denotes | immune system |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3 | 180-184 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T17 | 16-24 | Species | denotes | COVID-19 | NCBItxid:2697049 |
T18 | 170-179 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T19 | 231-240 | Species | denotes | SARS-CoV2 | NCBItxid:2697049 |
T20 | 303-311 | Species | denotes | COVID-19 | NCBItxid:2697049 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19 | 26-137 | Sentence | denotes | Tocilizumab, a monoclonal antibody against IL6, could confer clinical benefit in patients with high IL6 levels. |
T20 | 138-320 | Sentence | denotes | Essential elements that process SARS-CoV2 cell entry and specific characteristics that allow SARS-CoV2 to escape the immune system have the potential as targets for COVID-19 therapy. |
LitCovid-sample-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 255-268 | Body_part | denotes | immune system | http://purl.obolibrary.org/obo/UBERON_0002405 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
60 | 2-10 | Species | denotes | patients | Tax:9606 |
76 | 16-24 | Disease | denotes | COVID-19 | MESH:C000657245 |
64 | 26-37 | Chemical | denotes | Tocilizumab | MESH:C502936 |
51 | 69-72 | Gene | denotes | IL6 | Gene:3569 |
61 | 107-115 | Species | denotes | patients | Tax:9606 |
52 | 126-129 | Gene | denotes | IL6 | Gene:3569 |
62 | 170-179 | Species | denotes | SARS-CoV2 | Tax:2697049 |
63 | 231-240 | Species | denotes | SARS-CoV2 | Tax:2697049 |
77 | 303-311 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T177 | 69-72 | Protein | denotes | IL6 | https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0 |
T221 | 126-129 | Protein | denotes | IL6 | https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T219 | 2-10 | NNS | denotes | patients |
T220 | 11-15 | IN | denotes | with |
T221 | 16-24 | NN | denotes | COVID-19 |
T222 | 26-37 | NNP | denotes | Tocilizumab |
T223 | 37-38 | -COMMA- | denotes | , |
T224 | 39-40 | DT | denotes | a |
T225 | 41-51 | JJ | denotes | monoclonal |
T226 | 52-60 | NN | denotes | antibody |
T227 | 61-68 | IN | denotes | against |
T228 | 69-72 | NN | denotes | IL6 |
T229 | 72-73 | -COMMA- | denotes | , |
T230 | 74-79 | MD | denotes | could |
T231 | 80-86 | VB | denotes | confer |
T232 | 87-95 | JJ | denotes | clinical |
T233 | 96-103 | NN | denotes | benefit |
T234 | 104-106 | IN | denotes | in |
T235 | 107-115 | NNS | denotes | patients |
T236 | 116-120 | IN | denotes | with |
T237 | 121-125 | JJ | denotes | high |
T238 | 126-129 | NN | denotes | IL6 |
T239 | 130-136 | NNS | denotes | levels |
T240 | 138-147 | JJ | denotes | Essential |
T241 | 148-156 | NNS | denotes | elements |
T242 | 157-161 | IN | denotes | that |
T243 | 162-169 | NN | denotes | process |
T244 | 170-179 | NN | denotes | SARS-CoV2 |
T245 | 180-184 | NN | denotes | cell |
T246 | 185-190 | NN | denotes | entry |
T247 | 191-194 | CC | denotes | and |
T248 | 195-203 | JJ | denotes | specific |
T249 | 204-219 | NNS | denotes | characteristics |
T250 | 220-224 | WDT | denotes | that |
T251 | 225-230 | VBP | denotes | allow |
T252 | 231-240 | NN | denotes | SARS-CoV2 |
T253 | 241-243 | TO | denotes | to |
T254 | 244-250 | VB | denotes | escape |
T255 | 251-254 | DT | denotes | the |
T256 | 255-261 | JJ | denotes | immune |
T257 | 262-268 | NN | denotes | system |
T258 | 269-273 | VBP | denotes | have |
T259 | 274-277 | DT | denotes | the |
T260 | 278-287 | NN | denotes | potential |
T261 | 288-290 | IN | denotes | as |
T262 | 291-298 | NNS | denotes | targets |
T263 | 299-302 | IN | denotes | for |
T264 | 303-311 | NN | denotes | COVID-19 |
T265 | 312-319 | NN | denotes | therapy |
T266 | 322-323 | CD | denotes | 1 |
R245 | T254 | T253 | arg1Of | escape,to |
R246 | T252 | T254 | arg1Of | SARS-CoV2,escape |
R248 | T257 | T255 | arg1Of | system,the |
R249 | T257 | T256 | arg1Of | system,immune |
R250 | T247 | T258 | arg1Of | and,have |
R251 | T260 | T258 | arg2Of | potential,have |
R252 | T260 | T259 | arg1Of | potential,the |
R253 | T258 | T261 | arg1Of | have,as |
R211 | T219 | T220 | arg1Of | patients,with |
R212 | T221 | T220 | arg2Of | COVID-19,with |
R213 | T222 | T223 | arg1Of | Tocilizumab,"," |
R214 | T226 | T223 | arg2Of | antibody,"," |
R215 | T226 | T224 | arg1Of | antibody,a |
R216 | T226 | T225 | arg1Of | antibody,monoclonal |
R217 | T226 | T227 | arg1Of | antibody,against |
R218 | T228 | T227 | arg2Of | IL6,against |
R219 | T231 | T229 | arg1Of | confer,"," |
R220 | T222 | T230 | arg1Of | Tocilizumab,could |
R221 | T231 | T230 | arg2Of | confer,could |
R222 | T222 | T231 | arg1Of | Tocilizumab,confer |
R223 | T233 | T231 | arg2Of | benefit,confer |
R224 | T233 | T232 | arg1Of | benefit,clinical |
R225 | T231 | T234 | arg1Of | confer,in |
R226 | T235 | T234 | arg2Of | patients,in |
R227 | T235 | T236 | arg1Of | patients,with |
R228 | T239 | T236 | arg2Of | levels,with |
R229 | T239 | T237 | arg1Of | levels,high |
R230 | T239 | T238 | arg1Of | levels,IL6 |
R231 | T241 | T240 | arg1Of | elements,Essential |
R232 | T241 | T242 | arg1Of | elements,that |
R233 | T247 | T242 | arg2Of | and,that |
R234 | T258 | T242 | arg3Of | have,that |
R235 | T246 | T243 | arg1Of | entry,process |
R236 | T246 | T244 | arg1Of | entry,SARS-CoV2 |
R237 | T246 | T245 | arg1Of | entry,cell |
R238 | T246 | T247 | arg1Of | entry,and |
R239 | T249 | T247 | arg2Of | characteristics,and |
R240 | T249 | T248 | arg1Of | characteristics,specific |
R241 | T249 | T250 | arg1Of | characteristics,that |
R242 | T249 | T251 | arg1Of | characteristics,allow |
R243 | T252 | T251 | arg2Of | SARS-CoV2,allow |
R244 | T254 | T251 | arg3Of | escape,allow |
R247 | T257 | T254 | arg2Of | system,escape |
R254 | T262 | T261 | arg2Of | targets,as |
R255 | T262 | T263 | arg1Of | targets,for |
R256 | T265 | T263 | arg2Of | therapy,for |
R257 | T265 | T264 | arg1Of | therapy,COVID-19 |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T5 | 52-60 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T6 | 180-184 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T7 | 255-268 | Body_part | denotes | immune system | http://purl.org/sig/ont/fma/fma9825 |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T17 | 16-24 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T18 | 170-179 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T19 | 231-240 | Disease | denotes | SARS-CoV2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T20 | 303-311 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19 | 26-137 | Sentence | denotes | Tocilizumab, a monoclonal antibody against IL6, could confer clinical benefit in patients with high IL6 levels. |
T20 | 138-320 | Sentence | denotes | Essential elements that process SARS-CoV2 cell entry and specific characteristics that allow SARS-CoV2 to escape the immune system have the potential as targets for COVID-19 therapy. |