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PMC:7205724 / 1410-1626 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
51 100-103 Gene denotes IL6 Gene:3569
52 157-160 Gene denotes IL6 Gene:3569
60 33-41 Species denotes patients Tax:9606
61 138-146 Species denotes patients Tax:9606
62 201-210 Species denotes SARS-CoV2 Tax:2697049
64 57-68 Chemical denotes Tocilizumab MESH:C502936
76 47-55 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T5 83-91 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T6 211-215 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 47-55 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 201-205 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 70-71 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 211-215 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T3 4-14 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes viral load http://purl.bioontology.org/ontology/MEDDRA/10062178

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T3 211-215 http://purl.obolibrary.org/obo/CL_0000000 denotes cell

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T17 47-55 Species denotes COVID-19 NCBItxid:2697049
T18 201-210 Species denotes SARS-CoV2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T19 57-168 Sentence denotes Tocilizumab, a monoclonal antibody against IL6, could confer clinical benefit in patients with high IL6 levels.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
60 33-41 Species denotes patients Tax:9606
76 47-55 Disease denotes COVID-19 MESH:C000657245
64 57-68 Chemical denotes Tocilizumab MESH:C502936
51 100-103 Gene denotes IL6 Gene:3569
61 138-146 Species denotes patients Tax:9606
52 157-160 Gene denotes IL6 Gene:3569
62 201-210 Species denotes SARS-CoV2 Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T177 100-103 Protein denotes IL6 https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0
T221 157-160 Protein denotes IL6 https://www.uniprot.org/uniprot/Q9XT80|https://www.uniprot.org/uniprot/Q9UCU4|https://www.uniprot.org/uniprot/Q9UCU3|https://www.uniprot.org/uniprot/Q9UCU2|https://www.uniprot.org/uniprot/Q9MZR1|https://www.uniprot.org/uniprot/Q9MYZ7|https://www.uniprot.org/uniprot/Q95KN6|https://www.uniprot.org/uniprot/Q95181|https://www.uniprot.org/uniprot/Q90YI0|https://www.uniprot.org/uniprot/Q8MKH0|https://www.uniprot.org/uniprot/Q8BN26|https://www.uniprot.org/uniprot/Q865X6|https://www.uniprot.org/uniprot/Q865W7|https://www.uniprot.org/uniprot/Q6V919|https://www.uniprot.org/uniprot/Q6L6X6|https://www.uniprot.org/uniprot/Q5I6E3|https://www.uniprot.org/uniprot/Q3UCQ0|https://www.uniprot.org/uniprot/Q2MH06|https://www.uniprot.org/uniprot/Q28819|https://www.uniprot.org/uniprot/Q28747|https://www.uniprot.org/uniprot/Q28319|https://www.uniprot.org/uniprot/Q25BC2|https://www.uniprot.org/uniprot/Q0PW36|https://www.uniprot.org/uniprot/Q0GGL7|https://www.uniprot.org/uniprot/Q08DT2|https://www.uniprot.org/uniprot/P79341|https://www.uniprot.org/uniprot/P51494|https://www.uniprot.org/uniprot/P46650|https://www.uniprot.org/uniprot/P41693|https://www.uniprot.org/uniprot/P41683|https://www.uniprot.org/uniprot/P41323|https://www.uniprot.org/uniprot/P29455|https://www.uniprot.org/uniprot/P26893|https://www.uniprot.org/uniprot/P26892|https://www.uniprot.org/uniprot/P20607|https://www.uniprot.org/uniprot/P08505|https://www.uniprot.org/uniprot/P05231|https://www.uniprot.org/uniprot/O46568|https://www.uniprot.org/uniprot/O35736|https://www.uniprot.org/uniprot/O19007|https://www.uniprot.org/uniprot/B6CKP4|https://www.uniprot.org/uniprot/A9QWQ9|https://www.uniprot.org/uniprot/A3FBE9|https://www.uniprot.org/uniprot/A0S0B0

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T212 2-3 -COMMA- denotes ,
T213 4-9 JJ denotes viral
T214 10-14 NN denotes load
T215 14-15 -COMMA- denotes ,
T216 16-19 CC denotes and
T217 20-29 NN denotes prognosis
T218 30-32 IN denotes of
T219 33-41 NNS denotes patients
T220 42-46 IN denotes with
T221 47-55 NN denotes COVID-19
T222 57-68 NNP denotes Tocilizumab
T223 68-69 -COMMA- denotes ,
T224 70-71 DT denotes a
T225 72-82 JJ denotes monoclonal
T226 83-91 NN denotes antibody
T227 92-99 IN denotes against
T228 100-103 NN denotes IL6
T229 103-104 -COMMA- denotes ,
T230 105-110 MD denotes could
T231 111-117 VB denotes confer
T232 118-126 JJ denotes clinical
T233 127-134 NN denotes benefit
T234 135-137 IN denotes in
T235 138-146 NNS denotes patients
T236 147-151 IN denotes with
T237 152-156 JJ denotes high
T238 157-160 NN denotes IL6
T239 161-167 NNS denotes levels
T240 169-178 JJ denotes Essential
T241 179-187 NNS denotes elements
T242 188-192 IN denotes that
T243 193-200 NN denotes process
T244 201-210 NN denotes SARS-CoV2
T245 211-215 NN denotes cell
R204 T214 T212 arg2Of load,","
R205 T214 T213 arg1Of load,viral
R206 T216 T215 arg1Of and,","
R207 T212 T216 arg1Of ",",and
R208 T217 T216 arg2Of prognosis,and
R209 T217 T218 arg1Of prognosis,of
R210 T219 T218 arg2Of patients,of
R211 T219 T220 arg1Of patients,with
R212 T221 T220 arg2Of COVID-19,with
R213 T222 T223 arg1Of Tocilizumab,","
R214 T226 T223 arg2Of antibody,","
R215 T226 T224 arg1Of antibody,a
R216 T226 T225 arg1Of antibody,monoclonal
R217 T226 T227 arg1Of antibody,against
R218 T228 T227 arg2Of IL6,against
R219 T231 T229 arg1Of confer,","
R220 T222 T230 arg1Of Tocilizumab,could
R221 T231 T230 arg2Of confer,could
R222 T222 T231 arg1Of Tocilizumab,confer
R223 T233 T231 arg2Of benefit,confer
R224 T233 T232 arg1Of benefit,clinical
R225 T231 T234 arg1Of confer,in
R226 T235 T234 arg2Of patients,in
R227 T235 T236 arg1Of patients,with
R228 T239 T236 arg2Of levels,with
R229 T239 T237 arg1Of levels,high
R230 T239 T238 arg1Of levels,IL6
R231 T241 T240 arg1Of elements,Essential
R232 T241 T242 arg1Of elements,that

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T5 83-91 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T6 211-215 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T17 47-55 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 201-210 Disease denotes SARS-CoV2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T19 57-168 Sentence denotes Tocilizumab, a monoclonal antibody against IL6, could confer clinical benefit in patients with high IL6 levels.