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PMC:7205724 / 12242-12458 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
383 37-38 Gene denotes S Gene:43740568
394 64-68 Species denotes CoVs Tax:11118
395 78-87 Species denotes SARSr-CoV Tax:694009
396 171-180 Species denotes 2019-nCoV Tax:2697049

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T89 39-46 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T75 54-58 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T134 50-53 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T125 39-46 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T86 39-46 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T96 50-68 Species denotes bat SARS-like CoVs NCBItxid:1508227
T97 78-87 Species denotes SARSr-CoV NCBItxid:694009
T98 171-180 Species denotes 2019-nCoV NCBItxid:2697049

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
383 37-38 Gene denotes S Gene:43740568
394 64-68 Species denotes CoVs Tax:11118
395 78-87 Species denotes SARSr-CoV Tax:694009
396 171-180 Species denotes 2019-nCoV Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1266 37-46 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T86629 0-8 NN denotes sequence
T85333 9-17 NN denotes identity
T4126 18-20 IN denotes of
T23106 21-26 CD denotes 80–98
T47986 26-27 NN denotes %
T62529 28-32 IN denotes with
T47180 33-36 DT denotes the
T64906 37-38 NN denotes S
T55893 39-46 NN denotes protein
T84276 47-49 IN denotes of
T27337 50-53 NN denotes bat
T65227 54-63 JJ denotes SARS-like
T48841 64-68 NNS denotes CoVs
T43941 68-69 -COMMA- denotes ,
T76487 70-74 JJ denotes such
T69082 75-77 IN denotes as
T24341 78-87 JJ denotes SARSr-CoV
T77949 88-93 NN denotes ZXC21
T33016 94-95 NNP denotes S
T45981 95-96 -COMMA- denotes ,
T58714 97-101 NNP denotes ZC45
T47242 102-103 NNP denotes S
T24128 103-104 -COMMA- denotes ,
T33217 105-108 CC denotes and
T49688 109-115 NN denotes RaTG13
T48117 116-117 -LRB- denotes [
T8349 117-118 CD denotes 3
T82587 118-119 -RRB- denotes ]
T26826 121-129 RB denotes Moreover
T40424 129-130 -COMMA- denotes ,
T82603 131-133 IN denotes in
T83961 134-146 JJ denotes phylogenomic
T26439 147-152 NNS denotes trees
T36143 152-153 -COMMA- denotes ,
T1931 154-162 NNS denotes branches
T94548 163-166 IN denotes for
T9564 167-170 DT denotes the
T82190 171-180 NN denotes 2019-nCoV
T51998 181-184 VBP denotes are
T48884 185-187 IN denotes of
T84416 188-195 JJR denotes greater
T46091 196-202 NN denotes length
T44026 203-207 IN denotes than
T19745 208-213 DT denotes those
R9633 T55893 T62529 arg2Of protein,with
R8236 T55893 T47180 arg1Of protein,the
R37164 T55893 T64906 arg1Of protein,S
R27603 T55893 T84276 arg1Of protein,of
R84379 T48841 T84276 arg2Of CoVs,of
R59931 T48841 T27337 arg1Of CoVs,bat
R85967 T48841 T65227 arg1Of CoVs,SARS-like
R99461 T48841 T43941 arg1Of CoVs,","
R20816 T69082 T76487 arg1Of as,such
R77868 T48841 T69082 arg1Of CoVs,as
R4874 T85333 T86629 arg1Of identity,sequence
R2751 T85333 T4126 arg1Of identity,of
R99494 T47986 T4126 arg2Of %,of
R81734 T47986 T23106 arg1Of %,80–98
R59047 T33217 T69082 arg2Of and,as
R62932 T33016 T24341 arg1Of S,SARSr-CoV
R11481 T33016 T77949 arg1Of S,ZXC21
R38926 T33016 T45981 arg1Of S,","
R47300 T47242 T45981 arg2Of S,","
R77326 T47242 T58714 arg1Of S,ZC45
R75080 T33217 T24128 arg1Of and,","
R91783 T45981 T33217 arg1Of ",",and
R80254 T49688 T33217 arg2Of RaTG13,and
R54614 T49688 T48117 arg1Of RaTG13,[
R65396 T8349 T48117 arg2Of 3,[
R80187 T82587 T48117 arg3Of ],[
R79793 T51998 T26826 arg1Of are,Moreover
R43834 T51998 T40424 arg1Of are,","
R27649 T51998 T82603 arg1Of are,in
R96220 T26439 T82603 arg2Of trees,in
R84762 T26439 T83961 arg1Of trees,phylogenomic
R83564 T51998 T36143 arg1Of are,","
R35953 T1931 T94548 arg1Of branches,for
R50313 T82190 T94548 arg2Of 2019-nCoV,for
R39618 T82190 T9564 arg1Of 2019-nCoV,the
R26497 T1931 T51998 arg1Of branches,are
R81075 T51998 T48884 arg1Of are,of
R51585 T46091 T48884 arg2Of length,of
R73778 T46091 T84416 arg1Of length,greater
R53908 T51998 T44026 arg1Of are,than
R52362 T19745 T44026 arg2Of those,than

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T89 39-46 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T72 54-58 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091