PMC:7201239 / 5270-6468
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 249 | 0-13 | Species | denotes | Coronaviruses | Tax:11118 |
| 250 | 48-56 | Species | denotes | SARS-CoV | Tax:694009 |
| 251 | 58-73 | Species | denotes | Betacoronavirus | Tax:694002 |
| 252 | 204-210 | Species | denotes | humans | Tax:9606 |
| 253 | 218-226 | Species | denotes | SARS-CoV | Tax:694009 |
| 254 | 238-244 | Species | denotes | humans | Tax:9606 |
| 255 | 340-348 | Species | denotes | patients | Tax:9606 |
| 256 | 432-440 | Species | denotes | MERS-CoV | Tax:1335626 |
| 257 | 442-457 | Species | denotes | Betacoronavirus | Tax:694002 |
| 258 | 774-784 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 259 | 1063-1071 | Species | denotes | patients | Tax:9606 |
| 260 | 1169-1179 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 261 | 331-339 | Disease | denotes | infected | MESH:D007239 |
| 262 | 378-410 | Disease | denotes | Middle East Respiratory Syndrome | MESH:D018352 |
| 263 | 584-590 | Disease | denotes | deaths | MESH:D003643 |
| 264 | 846-868 | Disease | denotes | respiratory infections | MESH:D012141 |
| 265 | 879-888 | Disease | denotes | pneumonia | MESH:D011014 |
| 266 | 896-905 | Disease | denotes | mortality | MESH:D003643 |
| 267 | 1188-1197 | Disease | denotes | pneumonia | MESH:D011014 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T24 | 1005-1010 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T19 | 1005-1010 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T52 | 48-56 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T53 | 48-52 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T54 | 151-184 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T55 | 186-190 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T56 | 218-226 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T57 | 218-222 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T58 | 774-782 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T59 | 774-778 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T60 | 846-868 | Disease | denotes | respiratory infections | http://purl.obolibrary.org/obo/MONDO_0024355 |
| T61 | 879-888 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T62 | 1169-1177 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T63 | 1169-1173 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T64 | 1188-1197 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T87 | 82-83 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
| T88 | 204-210 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T89 | 211-213 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T90 | 238-244 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | humans |
| T91 | 304-305 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T92 | 529-532 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T93 | 610-613 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T94 | 894-895 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T95 | 1005-1010 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T9 | 846-868 | Phenotype | denotes | respiratory infections | http://purl.obolibrary.org/obo/HP_0011947 |
| T10 | 879-888 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T11 | 1188-1197 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 0-373 | Sentence | denotes | Coronaviruses strongly gained in notoriety when SARS-CoV (Betacoronavirus lineage b) emerged in China in March 2003 and was proven responsible for the severe acute respiratory syndrome (SARS) outbreak in humans.27 The SARS-CoV adapted to humans and became able to spread from person-to-person leading to a fatality rate of 9.6% in infected patients, causing global concern. |
| T24 | 374-508 | Sentence | denotes | The Middle East Respiratory Syndrome (MERS) caused by the MERS-CoV (Betacoronavirus lineage 2c), was reported in Saudi Arabia in 2012. |
| T25 | 509-998 | Sentence | denotes | This epidemic which has been one of the least deadly in absolute number of deaths, was the one which has created the most fears in health authorities and the most important panic in the populations due to its high fatality rate (case fatality rate of 34.7%).28 The SARS-CoV-2 that emerged in China at the end of 2019, is responsible for respiratory infections including pneumonia with a mortality rate estimated about 1%–2.5%,2 increasing with age and the existence of underlying diseases. |
| T26 | 999-1198 | Sentence | denotes | Under chest computerized tomography (CT) scans, the majority of patients show bilateral ground glass-like opacities and subsegmental areas of consolidation indicative of SARS-CoV-2 induced pneumonia. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32414646-12730501-62239768 | 211-213 | 12730501 | denotes | 27 |
| 32414646-23075143-62239769 | 767-769 | 23075143 | denotes | 28 |
| 32414646-31986264-62239770 | 935-936 | 31986264 | denotes | 2 |