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PMC:7201239 / 4489-5269 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
208 104-112 Species denotes patients Tax:9606
209 148-157 Species denotes HCoV-229E Tax:11137
210 170-179 Species denotes HCoV-HKU1 Tax:290028
211 192-201 Species denotes HCoV-NL63 Tax:277944
212 219-228 Species denotes HCoV-OC43 Tax:31631
213 293-298 Species denotes child Tax:9606
214 336-345 Species denotes HCoV-229E Tax:11137
215 359-368 Species denotes HCoV-NL63 Tax:277944
216 386-395 Species denotes HCoV-OC43 Tax:31631
217 486-494 Species denotes patients Tax:9606
218 548-557 Species denotes HCoV-229E Tax:11137
219 576-585 Species denotes HCoV-HKU1 Tax:290028
220 605-614 Species denotes HCoV-NL63 Tax:277944
221 638-647 Species denotes HCoV-OC43 Tax:31631
222 709-722 Species denotes coronaviruses Tax:11118
227 118-137 Disease denotes respiratory disease MESH:D012140
228 316-325 Disease denotes pneumonia MESH:D011014
229 506-534 Disease denotes respiratory tract infections MESH:D012141

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T22 451-457 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T23 506-523 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T16 18-23 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T17 451-457 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T18 506-523 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T49 118-137 Disease denotes respiratory disease http://purl.obolibrary.org/obo/MONDO_0005087
T50 316-325 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T51 506-534 Disease denotes respiratory tract infections http://purl.obolibrary.org/obo/MONDO_0024355

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T80 10-11 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T81 145-147 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T82 237-239 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T83 240-241 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T84 332-335 http://purl.obolibrary.org/obo/CLO_0053001 denotes 114
T85 355-358 http://purl.obolibrary.org/obo/CLO_0001003 denotes 163
T86 544-547 http://purl.obolibrary.org/obo/CLO_0053001 denotes 114

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 316-325 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T8 500-534 Phenotype denotes acute respiratory tract infections http://purl.obolibrary.org/obo/HP_0011948

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T22 0-780 Sentence denotes 10.4%).21 A large-scale polymerase chain reaction (PCR) screening of 11,661 nasal samples from European patients with respiratory disease, found 35 HCoV-229E (0.30%), 61 HCoV-HKU1 (0.52%), 75 HCoV-NL63 (0.64%), and 111 HCoV-OC43 (0.85%).22 A similar study in Africa on 5573 nasal samples from child hospitalized for pneumonia found 114 HCoV-229E (2.05%), 163 HCoV-NL63 (2.93%), and 111 HCoV-OC43 (1.99%).23 Two Chinese studies involving almost 25,000 throat and nasal swab samples from patients with acute respiratory tract infections revealed 114 HCoV-229E (0.37%–0.57%), 61 HCoV-HKU1 (0.18%–0.33%), 104 HCoV-NL63 (0.33%–0.52%), and 523 HCoV-OC43 (1.36%–3.04%), respectively.24 , 25 The fatality rate of the coronaviruses causing the common winter cold was estimated 0.5%–1.5%.26

2_test

Id Subject Object Predicate Lexical cue
32414646-20554810-62239765 237-239 20554810 denotes 22
32414646-29741740-62239766 404-406 29741740 denotes 23
32414646-29377913-62239767 681-683 29377913 denotes 25