PMC:7201239 / 4489-5269
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 208 | 104-112 | Species | denotes | patients | Tax:9606 |
| 209 | 148-157 | Species | denotes | HCoV-229E | Tax:11137 |
| 210 | 170-179 | Species | denotes | HCoV-HKU1 | Tax:290028 |
| 211 | 192-201 | Species | denotes | HCoV-NL63 | Tax:277944 |
| 212 | 219-228 | Species | denotes | HCoV-OC43 | Tax:31631 |
| 213 | 293-298 | Species | denotes | child | Tax:9606 |
| 214 | 336-345 | Species | denotes | HCoV-229E | Tax:11137 |
| 215 | 359-368 | Species | denotes | HCoV-NL63 | Tax:277944 |
| 216 | 386-395 | Species | denotes | HCoV-OC43 | Tax:31631 |
| 217 | 486-494 | Species | denotes | patients | Tax:9606 |
| 218 | 548-557 | Species | denotes | HCoV-229E | Tax:11137 |
| 219 | 576-585 | Species | denotes | HCoV-HKU1 | Tax:290028 |
| 220 | 605-614 | Species | denotes | HCoV-NL63 | Tax:277944 |
| 221 | 638-647 | Species | denotes | HCoV-OC43 | Tax:31631 |
| 222 | 709-722 | Species | denotes | coronaviruses | Tax:11118 |
| 227 | 118-137 | Disease | denotes | respiratory disease | MESH:D012140 |
| 228 | 316-325 | Disease | denotes | pneumonia | MESH:D011014 |
| 229 | 506-534 | Disease | denotes | respiratory tract infections | MESH:D012141 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T22 | 451-457 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T23 | 506-523 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T16 | 18-23 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T17 | 451-457 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T18 | 506-523 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T49 | 118-137 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T50 | 316-325 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T51 | 506-534 | Disease | denotes | respiratory tract infections | http://purl.obolibrary.org/obo/MONDO_0024355 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T80 | 10-11 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T81 | 145-147 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T82 | 237-239 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T83 | 240-241 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T84 | 332-335 | http://purl.obolibrary.org/obo/CLO_0053001 | denotes | 114 |
| T85 | 355-358 | http://purl.obolibrary.org/obo/CLO_0001003 | denotes | 163 |
| T86 | 544-547 | http://purl.obolibrary.org/obo/CLO_0053001 | denotes | 114 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T7 | 316-325 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T8 | 500-534 | Phenotype | denotes | acute respiratory tract infections | http://purl.obolibrary.org/obo/HP_0011948 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T22 | 0-780 | Sentence | denotes | 10.4%).21 A large-scale polymerase chain reaction (PCR) screening of 11,661 nasal samples from European patients with respiratory disease, found 35 HCoV-229E (0.30%), 61 HCoV-HKU1 (0.52%), 75 HCoV-NL63 (0.64%), and 111 HCoV-OC43 (0.85%).22 A similar study in Africa on 5573 nasal samples from child hospitalized for pneumonia found 114 HCoV-229E (2.05%), 163 HCoV-NL63 (2.93%), and 111 HCoV-OC43 (1.99%).23 Two Chinese studies involving almost 25,000 throat and nasal swab samples from patients with acute respiratory tract infections revealed 114 HCoV-229E (0.37%–0.57%), 61 HCoV-HKU1 (0.18%–0.33%), 104 HCoV-NL63 (0.33%–0.52%), and 523 HCoV-OC43 (1.36%–3.04%), respectively.24 , 25 The fatality rate of the coronaviruses causing the common winter cold was estimated 0.5%–1.5%.26 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32414646-20554810-62239765 | 237-239 | 20554810 | denotes | 22 |
| 32414646-29741740-62239766 | 404-406 | 29741740 | denotes | 23 |
| 32414646-29377913-62239767 | 681-683 | 29377913 | denotes | 25 |