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PMC:7201239 / 2652-3785 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
144 1040-1044 Gene denotes ACE2 Gene:59272
145 0-13 Species denotes Coronaviruses Tax:11118
146 15-18 Species denotes CoV Tax:11118
147 132-138 Species denotes humans Tax:9606
148 203-216 Species denotes coronaviruses Tax:11118
149 256-264 Species denotes SARS-CoV Tax:694009
150 294-302 Species denotes SARS-CoV Tax:694009
151 317-322 Species denotes human Tax:9606
152 355-358 Species denotes CoV Tax:11118
153 483-489 Species denotes humans Tax:9606
154 497-505 Species denotes MERS-CoV Tax:1335626
155 541-544 Species denotes CoV Tax:11118
156 577-583 Species denotes humans Tax:9606
157 614-620 Species denotes camels Tax:9837
158 665-675 Species denotes SARS-CoV-2 Tax:2697049
159 679-685 Species denotes humans Tax:9606
160 750-761 Species denotes coronavirus Tax:11118
161 793-812 Species denotes Rhinolophus affinis Tax:59477
162 956-970 Species denotes Manis javanica Tax:9974
163 1002-1012 Species denotes SARS-CoV-2 Tax:2697049
164 1020-1030 Species denotes SARS-CoV-2 Tax:2697049
165 1125-1130 Species denotes human Tax:9606
166 392-403 Species denotes Rhinolophus Tax:59477
167 605-613 Disease denotes infected MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T21 452-456 Body_part denotes palm http://purl.org/sig/ont/fma/fma24920

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 256-264 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T38 256-260 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T39 294-302 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T40 294-298 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T41 345-349 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T42 665-673 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T43 665-669 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T44 1002-1010 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T45 1002-1006 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 1020-1028 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T47 1020-1024 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T50 33-37 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T51 78-84 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T52 132-138 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T53 163-167 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T54 265-267 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T55 315-316 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T56 317-322 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T57 404-408 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T58 483-489 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T59 522-523 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T60 537-540 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T61 577-583 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T62 614-620 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camels
T63 679-685 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T64 717-722 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T65 738-739 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T66 740-743 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T67 813-816 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T68 825-827 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T69 866-872 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T70 879-882 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T71 944-945 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T72 1050-1053 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T73 1125-1130 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T17 0-1133 Sentence denotes Coronaviruses (CoV) circulate in bats and generally pass over an intermediate animal host before crossing species barrier to infect humans.10 Different species of bats in China carry genetically diverse coronaviruses, some of which are direct ancestors of SARS-CoV.11, 12, 13 Indeed, the first SARS-CoV that caused a human outbreak derived from SARS-like CoV circulating in Chinese horseshoe Rhinolophus bats which apparently adapted to wild Himalayan palm-civet before spreading in humans.14 The MERS-CoV originated from a Pipistrellus bat CoV and was probably transmitted to humans through contact with infected camels.15, 16, 17 Soon after the first outbreak of SARS-CoV-2 in humans, it was reported that this new virus was related to a bat-borne coronavirus (BatCoV RaTG13) present in the Rhinolophus affinis bat species.18 The identification of an intermediate animal hosts has been the subject of intense research and it was claimed that a pangolin (Manis javanica) was the intermediate host for SARS-CoV-2.19 The SARS-CoV-2 receptor ACE2 from bat and pangolin and several other species, were found to resemble that of human.20

2_test

Id Subject Object Predicate Lexical cue
32414646-26689940-62239759 265-267 26689940 denotes 11
32414646-27743750-62239760 269-271 27743750 denotes 12
32414646-29696007-62239761 273-275 29696007 denotes 13
32414646-15695582-62239762 490-492 15695582 denotes 14
32414646-25211075-62239763 621-623 25211075 denotes 15
32414646-26678874-62239764 625-627 26678874 denotes 16