PMC:7200337 / 64398-65250
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T587 | 19-25 | Body_part | denotes | Organs | http://purl.org/sig/ont/fma/fma67498 |
T588 | 95-117 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
T589 | 119-126 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
T590 | 132-138 | Body_part | denotes | testis | http://purl.org/sig/ont/fma/fma7210 |
T591 | 200-204 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T592 | 262-267 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
T593 | 269-294 | Body_part | denotes | alveolar epithelial cells | http://purl.org/sig/ont/fma/fma62499 |
T594 | 289-294 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T595 | 345-361 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T596 | 356-361 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T597 | 370-375 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T598 | 402-413 | Body_part | denotes | hepatocytes | http://purl.org/sig/ont/fma/fma14515 |
T599 | 415-428 | Body_part | denotes | Kupffer cells | http://purl.org/sig/ont/fma/fma14656 |
T600 | 423-428 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T601 | 433-450 | Body_part | denotes | endothelial cells | http://purl.org/sig/ont/fma/fma66772 |
T602 | 445-450 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T603 | 504-509 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T604 | 577-588 | Body_part | denotes | enterocytes | http://purl.org/sig/ont/fma/fma62122 |
T605 | 596-611 | Body_part | denotes | small intestine | http://purl.org/sig/ont/fma/fma7200 |
T606 | 628-633 | Body_part | denotes | colon | http://purl.org/sig/ont/fma/fma14543 |
T607 | 723-730 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T608 | 736-747 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
T609 | 754-764 | Body_part | denotes | neutrophil | http://purl.org/sig/ont/fma/fma62860 |
T610 | 768-778 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T70 | 19-25 | Body_part | denotes | Organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
T71 | 132-138 | Body_part | denotes | testis | http://purl.obolibrary.org/obo/UBERON_0000473 |
T72 | 182-188 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
T73 | 370-375 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T74 | 504-509 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T75 | 596-611 | Body_part | denotes | small intestine | http://purl.obolibrary.org/obo/UBERON_0002108 |
T76 | 602-611 | Body_part | denotes | intestine | http://purl.obolibrary.org/obo/UBERON_0000160 |
T77 | 628-633 | Body_part | denotes | colon | http://purl.obolibrary.org/obo/UBERON_0001155 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T392 | 68-76 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T393 | 510-516 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T746 | 19-37 | http://purl.obolibrary.org/obo/UBERON_0000467 | denotes | Organs and Systems |
T747 | 95-117 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
T748 | 119-126 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
T749 | 119-126 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
T750 | 119-126 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
T751 | 132-138 | http://www.ebi.ac.uk/efo/EFO_0000984 | denotes | testis |
T752 | 182-188 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organs |
T753 | 200-210 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell types |
T754 | 262-267 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
T755 | 278-288 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T756 | 289-294 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T757 | 345-355 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T758 | 356-361 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T759 | 370-375 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T96254 | 370-375 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T761 | 423-428 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T762 | 433-450 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
T763 | 504-509 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T764 | 504-509 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T765 | 596-611 | http://purl.obolibrary.org/obo/UBERON_0002108 | denotes | small intestine |
T766 | 628-633 | http://purl.obolibrary.org/obo/UBERON_0001155 | denotes | colon |
T767 | 679-680 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T768 | 698-705 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptide |
T769 | 790-801 | http://purl.obolibrary.org/obo/PR_000007299 | denotes | prothrombin |
T770 | 814-823 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T49020 | 641-652 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
T9385 | 674-677 | Chemical | denotes | BNP | http://purl.obolibrary.org/obo/CHEBI_80234 |
T32155 | 698-705 | Chemical | denotes | peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
T73 | 723-730 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T34446 | 732-734 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T67041 | 786-788 | Chemical | denotes | PT | http://purl.obolibrary.org/obo/CHEBI_141395 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1996 | 0-4 | Gene | denotes | ACE2 | Gene:59272 |
1997 | 68-76 | Disease | denotes | COVID-19 | MESH:C000657245 |
2005 | 156-160 | Gene | denotes | ACE2 | Gene:59272 |
2006 | 307-311 | Gene | denotes | ACE2 | Gene:59272 |
2007 | 377-381 | Gene | denotes | ACE2 | Gene:59272 |
2008 | 546-550 | Gene | denotes | ACE2 | Gene:59272 |
2009 | 621-623 | Gene | denotes | to | Gene:6999 |
2010 | 517-519 | Gene | denotes | to | Gene:6999 |
2011 | 504-516 | Disease | denotes | liver injury | MESH:D017093 |
2018 | 635-639 | Gene | denotes | ACE2 | Gene:59272 |
2019 | 641-672 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
2020 | 674-677 | Gene | denotes | BNP | Gene:4879 |
2021 | 707-710 | Gene | denotes | CRP | Gene:1401 |
2022 | 712-730 | Gene | denotes | C-reactive protein | Gene:1401 |
2023 | 765-767 | Gene | denotes | to | Gene:6999 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T362 | 91-173 | Sentence | denotes | The gastrointestinal tract, kidneys, and testis have the highest ACE2 expressions. |
T363 | 174-532 | Sentence | denotes | In some organs, different cell types have remarkably distinct expressions; e.g., in the lungs, alveolar epithelial cells have higher ACE2 expression levels than bronchial epithelial cells; in the liver, ACE2 is not expressed in hepatocytes, Kupffer cells, or endothelial cells but is detected in cholangiocytes, which can explain liver injury to some extent. |
T364 | 533-634 | Sentence | denotes | Furthermore, ACE2 expression is enriched on enterocytes of the small intestine compared to the colon. |
T365 | 635-852 | Sentence | denotes | ACE2, angiotensin-converting enzyme 2; BNP, B-type natriuretic peptide; CRP, C-reactive protein; IL, interleukin; N/L, neutrophil-to-lymphocyte ratio; PT, prothrombin time; aPTT, activated partial thromboplastin time. |