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PMC:7200337 / 64398-65250 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T587 19-25 Body_part denotes Organs http://purl.org/sig/ont/fma/fma67498
T588 95-117 Body_part denotes gastrointestinal tract http://purl.org/sig/ont/fma/fma71132
T589 119-126 Body_part denotes kidneys http://purl.org/sig/ont/fma/fma7203
T590 132-138 Body_part denotes testis http://purl.org/sig/ont/fma/fma7210
T591 200-204 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T592 262-267 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T593 269-294 Body_part denotes alveolar epithelial cells http://purl.org/sig/ont/fma/fma62499
T594 289-294 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T595 345-361 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T596 356-361 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T597 370-375 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T598 402-413 Body_part denotes hepatocytes http://purl.org/sig/ont/fma/fma14515
T599 415-428 Body_part denotes Kupffer cells http://purl.org/sig/ont/fma/fma14656
T600 423-428 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T601 433-450 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T602 445-450 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T603 504-509 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T604 577-588 Body_part denotes enterocytes http://purl.org/sig/ont/fma/fma62122
T605 596-611 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200
T606 628-633 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T607 723-730 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T608 736-747 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578
T609 754-764 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T610 768-778 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T70 19-25 Body_part denotes Organs http://purl.obolibrary.org/obo/UBERON_0000062
T71 132-138 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T72 182-188 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062
T73 370-375 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T74 504-509 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T75 596-611 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T76 602-611 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T77 628-633 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T392 68-76 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T393 510-516 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T746 19-37 http://purl.obolibrary.org/obo/UBERON_0000467 denotes Organs and Systems
T747 95-117 http://purl.obolibrary.org/obo/UBERON_0005409 denotes gastrointestinal tract
T748 119-126 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidneys
T749 119-126 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidneys
T750 119-126 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidneys
T751 132-138 http://www.ebi.ac.uk/efo/EFO_0000984 denotes testis
T752 182-188 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T753 200-210 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T754 262-267 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T755 278-288 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T756 289-294 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T757 345-355 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T758 356-361 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T759 370-375 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T96254 370-375 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T761 423-428 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T762 433-450 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T763 504-509 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T764 504-509 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T765 596-611 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine
T766 628-633 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T767 679-680 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T768 698-705 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T769 790-801 http://purl.obolibrary.org/obo/PR_000007299 denotes prothrombin
T770 814-823 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T49020 641-652 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T9385 674-677 Chemical denotes BNP http://purl.obolibrary.org/obo/CHEBI_80234
T32155 698-705 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T73 723-730 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T34446 732-734 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T67041 786-788 Chemical denotes PT http://purl.obolibrary.org/obo/CHEBI_141395

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1996 0-4 Gene denotes ACE2 Gene:59272
1997 68-76 Disease denotes COVID-19 MESH:C000657245
2005 156-160 Gene denotes ACE2 Gene:59272
2006 307-311 Gene denotes ACE2 Gene:59272
2007 377-381 Gene denotes ACE2 Gene:59272
2008 546-550 Gene denotes ACE2 Gene:59272
2009 621-623 Gene denotes to Gene:6999
2010 517-519 Gene denotes to Gene:6999
2011 504-516 Disease denotes liver injury MESH:D017093
2018 635-639 Gene denotes ACE2 Gene:59272
2019 641-672 Gene denotes angiotensin-converting enzyme 2 Gene:59272
2020 674-677 Gene denotes BNP Gene:4879
2021 707-710 Gene denotes CRP Gene:1401
2022 712-730 Gene denotes C-reactive protein Gene:1401
2023 765-767 Gene denotes to Gene:6999

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T362 91-173 Sentence denotes The gastrointestinal tract, kidneys, and testis have the highest ACE2 expressions.
T363 174-532 Sentence denotes In some organs, different cell types have remarkably distinct expressions; e.g., in the lungs, alveolar epithelial cells have higher ACE2 expression levels than bronchial epithelial cells; in the liver, ACE2 is not expressed in hepatocytes, Kupffer cells, or endothelial cells but is detected in cholangiocytes, which can explain liver injury to some extent.
T364 533-634 Sentence denotes Furthermore, ACE2 expression is enriched on enterocytes of the small intestine compared to the colon.
T365 635-852 Sentence denotes ACE2, angiotensin-converting enzyme 2; BNP, B-type natriuretic peptide; CRP, C-reactive protein; IL, interleukin; N/L, neutrophil-to-lymphocyte ratio; PT, prothrombin time; aPTT, activated partial thromboplastin time.