PMC:7200337 / 35394-35736 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T363","span":{"begin":34,"end":39},"obj":"Body_part"},{"id":"T364","span":{"begin":221,"end":226},"obj":"Body_part"},{"id":"T365","span":{"begin":336,"end":341},"obj":"Body_part"}],"attributes":[{"id":"A363","pred":"fma_id","subj":"T363","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A364","pred":"fma_id","subj":"T364","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A365","pred":"fma_id","subj":"T365","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T235","span":{"begin":332,"end":334},"obj":"Disease"}],"attributes":[{"id":"A235","pred":"mondo_id","subj":"T235","obj":"http://purl.obolibrary.org/obo/MONDO_0005272"},{"id":"A236","pred":"mondo_id","subj":"T235","obj":"http://purl.obolibrary.org/obo/MONDO_0008383"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T415","span":{"begin":5,"end":10},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T416","span":{"begin":20,"end":23},"obj":"http://purl.obolibrary.org/obo/PR_000001004"},{"id":"T417","span":{"begin":28,"end":31},"obj":"http://purl.obolibrary.org/obo/CLO_0053438"},{"id":"T418","span":{"begin":32,"end":39},"obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"T419","span":{"begin":167,"end":173},"obj":"http://purl.obolibrary.org/obo/PR_000001015"},{"id":"T420","span":{"begin":178,"end":182},"obj":"http://purl.obolibrary.org/obo/PR_000001203"},{"id":"T421","span":{"begin":221,"end":226},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T422","span":{"begin":251,"end":254},"obj":"http://purl.obolibrary.org/obo/PR_000001004"},{"id":"T423","span":{"begin":279,"end":282},"obj":"http://purl.obolibrary.org/obo/CLO_0053438"},{"id":"T424","span":{"begin":336,"end":341},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T169","span":{"begin":288,"end":296},"obj":"Chemical"},{"id":"T170","span":{"begin":316,"end":324},"obj":"Chemical"},{"id":"T171","span":{"begin":332,"end":334},"obj":"Chemical"}],"attributes":[{"id":"A169","pred":"chebi_id","subj":"T169","obj":"http://purl.obolibrary.org/obo/CHEBI_35224"},{"id":"A170","pred":"chebi_id","subj":"T170","obj":"http://purl.obolibrary.org/obo/CHEBI_35224"},{"id":"A171","pred":"chebi_id","subj":"T171","obj":"http://purl.obolibrary.org/obo/CHEBI_73810"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T132","span":{"begin":268,"end":274},"obj":"http://purl.obolibrary.org/obo/GO_0007613"},{"id":"T133","span":{"begin":297,"end":303},"obj":"http://purl.obolibrary.org/obo/GO_0007613"},{"id":"T134","span":{"begin":325,"end":331},"obj":"http://purl.obolibrary.org/obo/GO_0007613"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-PubTator","denotations":[{"id":"1180","span":{"begin":20,"end":23},"obj":"Gene"},{"id":"1181","span":{"begin":28,"end":31},"obj":"Gene"},{"id":"1182","span":{"begin":167,"end":173},"obj":"Gene"},{"id":"1183","span":{"begin":178,"end":182},"obj":"Gene"},{"id":"1184","span":{"begin":251,"end":254},"obj":"Gene"},{"id":"1185","span":{"begin":279,"end":282},"obj":"Gene"},{"id":"1221","span":{"begin":61,"end":69},"obj":"Species"},{"id":"1243","span":{"begin":332,"end":334},"obj":"Disease"}],"attributes":[{"id":"A1180","pred":"tao:has_database_id","subj":"1180","obj":"Gene:920"},{"id":"A1181","pred":"tao:has_database_id","subj":"1181","obj":"Gene:925"},{"id":"A1182","pred":"tao:has_database_id","subj":"1182","obj":"Gene:5788"},{"id":"A1183","pred":"tao:has_database_id","subj":"1183","obj":"Gene:1236"},{"id":"A1184","pred":"tao:has_database_id","subj":"1184","obj":"Gene:920"},{"id":"A1185","pred":"tao:has_database_id","subj":"1185","obj":"Gene:925"},{"id":"A1221","pred":"tao:has_database_id","subj":"1221","obj":"Tax:9606"},{"id":"A1243","pred":"tao:has_database_id","subj":"1243","obj":"MESH:D001172"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}

{"project":"LitCovid-sentences","denotations":[{"id":"T197","span":{"begin":0,"end":342},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Both virus-specific CD4 and CD8 T cells were detected in all patients at average frequencies of 1.4% and 1.3%, respectively, and very limited phenotyping according to CD45RA and CCR7 expression status characterized these cells predominantly as either CD4 Tcm (central memory) or CD8 Tem (effector memory) and Temra (effector memory RA) cells."}