
PMC:7200337 / 24452-27804
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32505227-19587043-46575283 | 484-488 | 19587043 | denotes | 2009 |
32505227-27670241-46575284 | 964-968 | 27670241 | denotes | 2017 |
32505227-30778167-46575285 | 1179-1183 | 30778167 | denotes | 2019 |
32505227-15080302-46575286 | 1338-1342 | 15080302 | denotes | 2004 |
32505227-9486650-46575289 | 1780-1784 | 9486650 | denotes | 1998 |
32505227-9034158-46575290 | 1801-1805 | 9034158 | denotes | 1997 |
32505227-29302013-46575291 | 1907-1911 | 29302013 | denotes | 2018 |
32505227-26251193-46575293 | 2606-2610 | 26251193 | denotes | 2015 |
32505227-19559672-46575295 | 2940-2944 | 19559672 | denotes | 2009 |
32505227-30524877-46575296 | 3003-3007 | 30524877 | denotes | 2017 |
T69970 | 484-488 | 19587043 | denotes | 2009 |
T60836 | 964-968 | 27670241 | denotes | 2017 |
T91375 | 1179-1183 | 30778167 | denotes | 2019 |
T21517 | 1338-1342 | 15080302 | denotes | 2004 |
T58402 | 1780-1784 | 9486650 | denotes | 1998 |
T11232 | 1801-1805 | 9034158 | denotes | 1997 |
T15390 | 1907-1911 | 29302013 | denotes | 2018 |
T84673 | 2606-2610 | 26251193 | denotes | 2015 |
T83308 | 2940-2944 | 19559672 | denotes | 2009 |
T78837 | 3003-3007 | 30524877 | denotes | 2017 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T213 | 14-21 | Body_part | denotes | NK Cell | http://purl.org/sig/ont/fma/fma63147 |
T214 | 17-21 | Body_part | denotes | Cell | http://purl.org/sig/ont/fma/fma68646 |
T215 | 63-71 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T216 | 66-71 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T217 | 88-93 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T218 | 273-283 | Body_part | denotes | chemokines | http://purl.org/sig/ont/fma/fma241981 |
T219 | 400-408 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T220 | 403-408 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T221 | 440-448 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T222 | 443-448 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T223 | 491-495 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T224 | 496-504 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T225 | 499-504 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T226 | 669-677 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T227 | 672-677 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T228 | 693-697 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T229 | 765-769 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T230 | 812-821 | Body_part | denotes | leukocyte | http://purl.org/sig/ont/fma/fma62852 |
T231 | 831-834 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
T232 | 927-932 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T233 | 978-992 | Body_part | denotes | immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
T234 | 1030-1037 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T235 | 1033-1037 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T236 | 1098-1105 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T237 | 1101-1105 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T238 | 1201-1209 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T239 | 1204-1209 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T240 | 1259-1264 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T241 | 1436-1447 | Body_part | denotes | compartment | http://purl.org/sig/ont/fma/fma76577 |
T242 | 1488-1496 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T243 | 1491-1496 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T244 | 1506-1511 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
T245 | 1532-1539 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T246 | 1617-1625 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T247 | 1620-1625 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T248 | 1636-1641 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T249 | 1703-1707 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T250 | 1750-1753 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
T251 | 1873-1876 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T252 | 1992-2000 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T253 | 1995-2000 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T254 | 2105-2113 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T255 | 2108-2113 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T256 | 2192-2198 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
T257 | 2286-2293 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T258 | 2289-2293 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T259 | 2506-2514 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T260 | 2509-2514 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T261 | 2646-2652 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
T262 | 2752-2757 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T263 | 2787-2795 | Body_part | denotes | monocyte | http://purl.org/sig/ont/fma/fma62864 |
T264 | 2842-2850 | Body_part | denotes | NK cells | http://purl.org/sig/ont/fma/fma63147 |
T265 | 2845-2850 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T266 | 2903-2910 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T267 | 2906-2910 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T268 | 3047-3054 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T269 | 3050-3054 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T270 | 3148-3157 | Body_part | denotes | monocytes | http://purl.org/sig/ont/fma/fma62864 |
T271 | 3171-3178 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T272 | 3174-3178 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T273 | 3226-3231 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T274 | 3302-3309 | Body_part | denotes | NK cell | http://purl.org/sig/ont/fma/fma63147 |
T275 | 3305-3309 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T23 | 88-93 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T24 | 491-495 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T25 | 693-697 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T26 | 927-932 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T27 | 1259-1264 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T28 | 2752-2757 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T166 | 34-42 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T167 | 45-54 | Disease | denotes | Infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T168 | 97-105 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T169 | 416-425 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T170 | 543-551 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T171 | 615-623 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T172 | 1275-1283 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T173 | 1290-1298 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T174 | 1301-1310 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T175 | 1543-1551 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T176 | 1647-1655 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T177 | 1879-1888 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T178 | 2006-2014 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T179 | 2162-2170 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T180 | 2656-2664 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T181 | 3064-3068 | Disease | denotes | ADCC | http://purl.obolibrary.org/obo/MONDO_0008734 |
T182 | 3206-3214 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T183 | 3323-3331 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T240 | 14-21 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK Cell |
T241 | 63-71 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T242 | 88-93 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T243 | 88-93 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T244 | 180-181 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T245 | 400-408 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T246 | 426-431 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T247 | 440-448 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T248 | 491-495 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T249 | 491-495 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T250 | 496-504 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T251 | 669-677 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T252 | 687-692 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T253 | 693-697 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T254 | 693-697 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T255 | 706-707 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T256 | 765-769 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T257 | 806-811 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T258 | 855-857 | http://purl.obolibrary.org/obo/CLO_0052676 | denotes | Fc |
T259 | 867-876 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
T260 | 890-891 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T261 | 927-932 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T262 | 927-932 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T263 | 1030-1037 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T264 | 1098-1105 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T265 | 1201-1209 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T266 | 1259-1264 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T267 | 1259-1264 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T268 | 1488-1496 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T269 | 1506-1511 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
T270 | 1617-1625 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T271 | 1630-1633 | http://purl.obolibrary.org/obo/CLO_0053438 | denotes | CD8 |
T272 | 1634-1641 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cells |
T273 | 1703-1707 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T274 | 1907-1911 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T275 | 1914-1919 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | Genes |
T276 | 1992-2000 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T277 | 2105-2113 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T278 | 2192-2198 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T279 | 2286-2293 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T280 | 2399-2402 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T281 | 2475-2476 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T282 | 2506-2514 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T283 | 2646-2652 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T284 | 2752-2757 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T285 | 2752-2757 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T286 | 2787-2795 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocyte |
T287 | 2842-2850 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cells |
T288 | 2903-2910 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T289 | 3047-3054 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T290 | 3069-3072 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T291 | 3148-3157 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | monocytes |
T292 | 3171-3178 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
T293 | 3226-3231 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T294 | 3271-3280 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
T295 | 3302-3309 | http://purl.obolibrary.org/obo/CL_0000623 | denotes | NK cell |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T112 | 822-829 | Chemical | denotes | antigen | http://purl.obolibrary.org/obo/CHEBI_59132 |
T113 | 1756-1764 | Chemical | denotes | molecule | http://purl.obolibrary.org/obo/CHEBI_25367 |
T114 | 2217-2219 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T116 | 2368-2370 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T118 | 2385-2387 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T120 | 2500-2505 | Chemical | denotes | donor | http://purl.obolibrary.org/obo/CHEBI_17891 |
T121 | 2560-2571 | Chemical | denotes | tocilizumab | http://purl.obolibrary.org/obo/CHEBI_64360 |
T122 | 2573-2575 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T124 | 2701-2707 | Chemical | denotes | ligand | http://purl.obolibrary.org/obo/CHEBI_52214 |
T125 | 2852-2855 | Chemical | denotes | Guo | http://purl.obolibrary.org/obo/CHEBI_16750 |
T126 | 3039-3041 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T128 | 3258-3260 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T107 | 461-470 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
T108 | 461-470 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
T109 | 867-876 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T110 | 1033-1049 | http://purl.obolibrary.org/obo/GO_0048468 | denotes | cell development |
T111 | 2466-2487 | http://purl.obolibrary.org/obo/GO_0071613 | denotes | granzyme B production |
T112 | 2573-2578 | http://purl.obolibrary.org/obo/GO_0004915 | denotes | IL-6R |
T113 | 2903-2926 | http://purl.obolibrary.org/obo/GO_0001779 | denotes | NK cell differentiation |
T114 | 2906-2926 | http://purl.obolibrary.org/obo/GO_0030154 | denotes | cell differentiation |
T115 | 3064-3068 | http://purl.obolibrary.org/obo/GO_0001788 | denotes | ADCC |
T116 | 3174-3190 | http://purl.obolibrary.org/obo/GO_0008037 | denotes | cell recognition |
T117 | 3271-3280 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
771 | 34-54 | Disease | denotes | SARS-CoV-2 Infection | MESH:C000657245 |
794 | 156-162 | Gene | denotes | CD107a | Gene:3916 |
795 | 164-169 | Gene | denotes | Ksp37 | Gene:643236 |
796 | 171-181 | Gene | denotes | granzyme B | Gene:3002 |
797 | 187-197 | Gene | denotes | granulysin | Gene:10578 |
798 | 285-290 | Gene | denotes | IFN-ɣ | Gene:3458 |
799 | 296-301 | Gene | denotes | TNF-α | Gene:7124 |
800 | 555-559 | Gene | denotes | ACE2 | Gene:59272 |
801 | 720-723 | Gene | denotes | KIR | Gene:3805 |
802 | 106-114 | Species | denotes | patients | Tax:9606 |
803 | 416-431 | Species | denotes | influenza virus | Tax:11308 |
804 | 543-553 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
805 | 615-625 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
806 | 687-692 | Species | denotes | human | Tax:9606 |
807 | 1275-1285 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
808 | 1563-1571 | Species | denotes | patients | Tax:9606 |
809 | 806-811 | Species | denotes | human | Tax:9606 |
810 | 97-105 | Disease | denotes | COVID-19 | MESH:C000657245 |
811 | 213-234 | Disease | denotes | impaired cytotoxicity | MESH:D064420 |
812 | 603-611 | Disease | denotes | infected | MESH:D007239 |
813 | 770-782 | Disease | denotes | cytotoxicity | MESH:D064420 |
814 | 1295-1310 | Disease | denotes | CoV-1 infection | MESH:D018352 |
815 | 1543-1562 | Disease | denotes | SARS-CoV-2-infected | MESH:C000657245 |
852 | 1595-1600 | Gene | denotes | NKG2A | Gene:3821 |
853 | 1688-1693 | Gene | denotes | NKG2A | Gene:3821 |
854 | 1750-1755 | Gene | denotes | HLA-E | Gene:3133 |
855 | 1954-1958 | Gene | denotes | LAG3 | Gene:3902 |
856 | 1963-1967 | Gene | denotes | TIM3 | Gene:84868 |
857 | 2217-2221 | Gene | denotes | IL-6 | Gene:3569 |
858 | 2368-2372 | Gene | denotes | IL-6 | Gene:3569 |
859 | 2466-2476 | Gene | denotes | granzyme B | Gene:3002 |
860 | 2573-2578 | Gene | denotes | IL-6R | Gene:3570 |
861 | 2613-2618 | Gene | denotes | TNF-α | Gene:7124 |
862 | 2805-2810 | Gene | denotes | TNF-α | Gene:7124 |
863 | 2871-2876 | Gene | denotes | TNF-α | Gene:7124 |
864 | 2980-2985 | Gene | denotes | NKp46 | Gene:9437 |
865 | 3030-3035 | Gene | denotes | TNF-α | Gene:7124 |
866 | 3039-3043 | Gene | denotes | IL-6 | Gene:3569 |
867 | 3258-3262 | Gene | denotes | IL-6 | Gene:3569 |
868 | 3267-3270 | Gene | denotes | TNF | Gene:7124 |
869 | 2900-2902 | Gene | denotes | to | Gene:6999 |
870 | 2886-2888 | Gene | denotes | to | Gene:6999 |
871 | 2822-2824 | Gene | denotes | to | Gene:6999 |
872 | 2131-2133 | Gene | denotes | to | Gene:6999 |
873 | 1630-1633 | Gene | denotes | CD8 | Gene:925 |
874 | 1656-1664 | Species | denotes | patients | Tax:9606 |
875 | 2015-2023 | Species | denotes | patients | Tax:9606 |
876 | 2171-2179 | Species | denotes | patients | Tax:9606 |
877 | 2665-2673 | Species | denotes | patients | Tax:9606 |
878 | 3332-3340 | Species | denotes | patients | Tax:9606 |
879 | 2560-2571 | Chemical | denotes | tocilizumab | MESH:C502936 |
880 | 1647-1655 | Disease | denotes | COVID-19 | MESH:C000657245 |
881 | 1708-1720 | Disease | denotes | cytotoxicity | MESH:D064420 |
882 | 1873-1888 | Disease | denotes | HIV-1 infection | MESH:D015658 |
883 | 2006-2014 | Disease | denotes | COVID-19 | MESH:C000657245 |
884 | 2162-2170 | Disease | denotes | COVID-19 | MESH:C000657245 |
885 | 2656-2664 | Disease | denotes | COVID-19 | MESH:C000657245 |
886 | 3206-3225 | Disease | denotes | SARS-CoV-2-infected | MESH:C000657245 |
887 | 3323-3331 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T137 | 0-54 | Sentence | denotes | Impairment of NK Cell Function in SARS-CoV-2 Infection |
T138 | 55-343 | Sentence | denotes | Ex vivo NK cells from peripheral blood of COVID-19 patients have reduced intracellular expression of CD107a, Ksp37, granzyme B, and granulysin, suggesting an impaired cytotoxicity, as well as an impaired production of chemokines, IFN-ɣ, and TNF-α (Wilk et al., 2020, Zheng et al., 2020b). |
T139 | 344-409 | Sentence | denotes | Several pathways may contribute to the dysregulation of NK cells. |
T140 | 410-652 | Sentence | denotes | While influenza virus infects NK cells and induces apoptosis (Mao et al., 2009), lung NK cells do not express the entry receptor for SARS-CoV-2, ACE2, and are therefore unlikely to be directly infected by SARS-CoV-2 (Travaglini et al., 2020). |
T141 | 653-970 | Sentence | denotes | The majority of NK cells found in human lung display a mature CD16+KIR+CD56dim phenotype and are able to induce cell cytotoxicity in response to loss of human leukocyte antigen (HLA) class I or through Fc receptor signaling, although to a lower extent than their peripheral blood counterpart (Marquardt et al., 2017). |
T142 | 971-1185 | Sentence | denotes | Killer-immunoglobulin receptors (KIRs) are acquired during NK cell development alongside CD16 (FcRγIIIA) and are essential for NK cell licensing and subsequent capacity for cytolytic function (Sivori et al., 2019). |
T143 | 1186-1364 | Sentence | denotes | Frequencies of NK cells expressing CD16 and/or KIRs are decreased in the blood following SARS-CoV-2 and SARS-CoV-1 infection, respectively (Xia et al., 2004, Wang et al., 2020d). |
T144 | 1365-1572 | Sentence | denotes | Collectively, the data suggest either an impaired maturation of the NK compartment or migration of the mature, circulating NK cells into the lungs or other peripheral tissues of SARS-CoV-2-infected patients. |
T145 | 1573-1687 | Sentence | denotes | The immune checkpoint NKG2A is increased on NK cells and CD8 T cells from COVID-19 patients (Zheng et al., 2020b). |
T146 | 1688-1913 | Sentence | denotes | NKG2A inhibits cell cytotoxicity by binding the non-classical HLA-E molecule (Braud et al., 1998, Brooks et al., 1997), and this interaction is strongly correlated with poor control of HIV-1 infection (Ramsuran et al., 2018). |
T147 | 1914-2066 | Sentence | denotes | Genes encoding the inhibitory receptors LAG3 and TIM3 are also upregulated in NK cells from COVID-19 patients (Wilk et al., 2020, Hadjadj et al., 2020). |
T148 | 2067-2147 | Sentence | denotes | Thus, increased immune checkpoints on NK cells might contribute to viral escape. |
T149 | 2148-2343 | Sentence | denotes | Additionally, COVID-19 patients have higher plasma concentrations of IL-6 (Huang et al., 2020b), which significantly correlate with lower NK cell numbers (Wang et al., 2020d, Wang et al., 2020f). |
T150 | 2344-2612 | Sentence | denotes | In vitro stimulation by IL-6 and soluble IL-6 receptor has previously revealed impaired cytolytic functions (perforin and granzyme B production) by healthy donor NK cells, which can be restored following addition of tocilizumab (IL-6R blockade) (Cifaldi et al., 2015). |
T151 | 2613-2870 | Sentence | denotes | TNF-α is also upregulated in the plasma of COVID-19 patients (Huang et al., 2020b), and ligand-receptor interaction analysis of peripheral blood scRNA-seq data suggests that monocyte-secreted TNF-α might bind to its receptors on NK cells (Guo et al., 2020). |
T152 | 2871-3094 | Sentence | denotes | TNF-α is known to contribute to NK cell differentiation (Lee et al., 2009), which includes downregulation of NKp46 (Ivagnès et al., 2017), though no effect of TNF-α or IL-6 on NK cell-mediated ADCC has been reported so far. |
T153 | 3095-3352 | Sentence | denotes | Collectively, these data suggest that crosstalk with monocytes might impair NK cell recognition and killing of SARS-CoV-2-infected cells, and antibodies targeting IL-6 and TNF-signaling may benefit enhanced NK cell functions in COVID-19 patients (Figure 2). |