PMC:7200337 / 19011-19393
Annnotations
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32505227-16322745-46575261 | 103-107 | 16322745 | denotes | 2005 |
| 32505227-24065148-46575262 | 122-126 | 24065148 | denotes | 2014 |
| T21223 | 103-107 | 16322745 | denotes | 2005 |
| T70263 | 122-126 | 24065148 | denotes | 2014 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T135 | 6-17 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
| T136 | 248-255 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T137 | 272-283 | Body_part | denotes | lymph nodes | http://purl.org/sig/ont/fma/fma5034 |
| T138 | 272-277 | Body_part | denotes | lymph | http://purl.org/sig/ont/fma/fma9671 |
| T139 | 288-294 | Body_part | denotes | spleen | http://purl.org/sig/ont/fma/fma7196 |
| T140 | 313-324 | Body_part | denotes | macrophages | http://purl.org/sig/ont/fma/fma63261 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T12 | 272-283 | Body_part | denotes | lymph nodes | http://purl.obolibrary.org/obo/UBERON_0000029 |
| T13 | 272-277 | Body_part | denotes | lymph | http://purl.obolibrary.org/obo/UBERON_0002391 |
| T14 | 288-294 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T128 | 59-67 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T129 | 70-79 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T130 | 175-183 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T131 | 224-232 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T132 | 328-336 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T159 | 272-283 | http://purl.obolibrary.org/obo/UBERON_0000029 | denotes | lymph nodes |
| T160 | 288-294 | http://purl.obolibrary.org/obo/UBERON_0002106 | denotes | spleen |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T85 | 248-255 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T86 | 356-358 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 634 | 215-219 | Gene | denotes | ACE2 | Gene:59272 |
| 635 | 306-311 | Gene | denotes | CD169 | Gene:6614 |
| 636 | 356-360 | Gene | denotes | IL-6 | Gene:3569 |
| 646 | 43-45 | Gene | denotes | to | Gene:6999 |
| 647 | 46-54 | Species | denotes | MERS-CoV | Tax:1335626 |
| 648 | 175-185 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 649 | 224-234 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 650 | 337-345 | Species | denotes | patients | Tax:9606 |
| 652 | 59-79 | Disease | denotes | SARS-CoV-1 infection | MESH:C000657245 |
| 653 | 163-171 | Disease | denotes | infected | MESH:D007239 |
| 654 | 328-336 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T109 | 0-382 | Sentence | denotes | While macrophages are somewhat susceptible to MERS-CoV and SARS-CoV-1 infection (Perlman and Dandekar, 2005, Zhou et al., 2014), data do not suggest that they are infected by SARS-CoV-2, although one study reported ACE2 and SARS-CoV-2 nucleocapsid protein is expressed in lymph nodes and spleen-associated CD169+ macrophages of COVID-19 patients producing IL-6 (Chen et al., 2020h). |