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PMC:7200337 / 17551-18455 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T105 6-10 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T106 51-60 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T107 118-129 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T108 160-169 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T109 182-194 Body_part denotes granulocytes http://purl.org/sig/ont/fma/fma62854
T110 199-210 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T111 266-275 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864
T112 335-343 Body_part denotes monocyte http://purl.org/sig/ont/fma/fma62864
T113 352-363 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T114 510-522 Body_part denotes neutrophilic http://purl.org/sig/ont/fma/fma62860
T115 589-602 Body_part denotes myeloid cells http://purl.org/sig/ont/fma/fma70339
T116 597-602 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T117 680-688 Body_part denotes Monocyte http://purl.org/sig/ont/fma/fma62864
T118 723-731 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T119 726-731 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T120 737-742 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T121 806-814 Body_part denotes NK cells http://purl.org/sig/ont/fma/fma63147
T122 809-814 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T123 871-876 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T124 894-903 Body_part denotes monocytes http://purl.org/sig/ont/fma/fma62864

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T10 51-60 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T11 737-742 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T121 458-461 Disease denotes CRS http://purl.obolibrary.org/obo/MONDO_0007399|http://purl.obolibrary.org/obo/MONDO_0017361
T123 564-572 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T124 857-861 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T11301 160-169 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T3621 252-253 http://purl.obolibrary.org/obo/CLO_0001020 denotes ɑ
T320 266-275 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes
T78868 335-343 http://purl.obolibrary.org/obo/CL_0000576 denotes monocyte
T1737 597-602 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T84467 680-688 http://purl.obolibrary.org/obo/CL_0000576 denotes Monocyte
T47301 706-708 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T48426 723-731 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T52652 737-742 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T31933 737-742 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T14324 806-814 http://purl.obolibrary.org/obo/CL_0000623 denotes NK cells
T89373 871-876 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T45576 894-903 http://purl.obolibrary.org/obo/CL_0000576 denotes monocytes

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T74 0-2 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T76 6-8 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T78 239-241 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T80 697-702 Chemical denotes CXCL9 http://purl.obolibrary.org/obo/CHEBI_138154
T81 778-787 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T78 477-498 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
508 0-4 Gene denotes IL-6 Gene:3569
509 6-11 Gene denotes IL-1β Gene:3552
510 239-243 Gene denotes IL-6 Gene:3569
511 248-253 Gene denotes TNF-ɑ Gene:7124
512 697-708 Gene denotes CXCL9/10/11 Gene:4283
513 32-40 Disease denotes infected MESH:D007239
514 376-389 Disease denotes dysfunctional MESH:D009461
515 510-550 Disease denotes neutrophilic NETosis and microthrombosis MESH:C564275
516 564-572 Disease denotes COVID-19 MESH:C000657245
517 857-870 Disease denotes SARS-infected MESH:D045169

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T98 0-228 Sentence denotes IL-6, IL-1β, and IFN-I/III from infected pulmonary epithelia can induce inflammatory programs in resident (alternate) macrophages while recruiting inflammatory monocytes, as well as granulocytes and lymphocytes from circulation.
T99 229-321 Sentence denotes Sustained IL-6 and TNF-ɑ by incoming monocytes can drive several hyperinflammation cascades.
T100 322-444 Sentence denotes Inflammatory monocyte-derived macrophages can amplify dysfunctional responses in various ways (listed in top-left corner).
T101 445-582 Sentence denotes The systemic CRS- and sHLH-like inflammatory response can induce neutrophilic NETosis and microthrombosis, aggravating COVID-19 severity.
T102 583-679 Sentence denotes Other myeloid cells, such as pDCs, are purported to have an IFN-dependent role in viral control.
T103 680-743 Sentence denotes Monocyte-derived CXCL9/10/11 might recruit NK cells from blood.
T104 744-904 Sentence denotes Preliminary data suggest that the antiviral function of these NK cells might be regulated through crosstalk with SARS-infected cells and inflammatory monocytes.