> top > docs > PMC:7199903 > spans > 9191-9587 > annotations

PMC:7199903 / 9191-9587 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T52 148-155 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T53 304-317 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T37 260-268 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T59 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T60 130-132 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T91 2-9 Chemical denotes mixture http://purl.obolibrary.org/obo/CHEBI_60004
T92 44-51 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T93 148-155 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T94 212-219 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T95 273-280 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T96 304-317 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T97 388-395 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T46 68-73 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites
T47 133-138 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites
T48 299-303 http://purl.obolibrary.org/obo/IDO_0000531 denotes host
T49 341-346 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1522 0-1 DT denotes A
T1523 2-9 NN denotes mixture
T1524 10-12 IN denotes of
T1525 13-26 NN denotes oligomannose-
T1526 27-30 CC denotes and
T1527 31-43 JJ denotes complex-type
T1528 44-51 NNS denotes glycans
T1529 52-55 MD denotes can
T1530 56-58 VB denotes be
T1531 59-64 VBN denotes found
T1532 65-67 IN denotes at
T1533 68-73 NNS denotes sites
T1534 74-77 NN denotes N61
T1535 77-78 -COMMA- denotes ,
T1536 79-83 NN denotes N122
T1537 83-84 -COMMA- denotes ,
T1538 85-89 NN denotes N603
T1539 89-90 -COMMA- denotes ,
T1540 91-95 NN denotes N717
T1541 95-96 -COMMA- denotes ,
T1542 97-101 NN denotes N801
T1543 101-102 -COMMA- denotes ,
T1544 103-106 CC denotes and
T1545 107-112 NN denotes N1074
T1546 113-114 -LRB- denotes (
T1547 114-118 NN denotes Fig.
T1548 119-120 CD denotes 2
T1549 120-121 -RRB- denotes )
T1550 123-125 IN denotes Of
T1551 126-129 DT denotes the
T1552 130-132 CD denotes 22
T1553 133-138 NNS denotes sites
T1554 139-141 IN denotes on
T1555 142-145 DT denotes the
T1556 146-147 NN denotes S
T1557 148-155 NN denotes protein
T1558 155-156 -COMMA- denotes ,
T1559 157-158 CD denotes 8
T1560 159-166 VBP denotes contain
T1561 167-178 JJ denotes substantial
T1562 179-190 NNS denotes populations
T1563 191-193 IN denotes of
T1564 194-211 JJ denotes oligomannose-type
T1565 212-219 NNS denotes glycans
T1566 219-220 -COMMA- denotes ,
T1567 221-233 VBG denotes highlighting
T1568 234-237 WRB denotes how
T1569 238-241 DT denotes the
T1570 242-252 NN denotes processing
T1571 253-255 IN denotes of
T1572 256-259 DT denotes the
T1573 260-270 NN denotes SARS-CoV-2
T1574 271-272 NN denotes S
T1575 273-280 NNS denotes glycans
T1576 281-283 VBZ denotes is
T1577 284-293 JJ denotes divergent
T1578 294-298 IN denotes from
T1579 299-303 NN denotes host
T1580 304-317 NNS denotes glycoproteins
T1581 318-319 -LRB- denotes (
T1582 319-321 CD denotes 25
T1583 321-322 -RRB- denotes )
T1584 324-327 DT denotes The
T1585 328-337 VBG denotes remaining
T1586 338-340 CD denotes 14
T1587 341-346 NNS denotes sites
T1588 347-350 VBP denotes are
T1589 351-360 VBN denotes dominated
T1590 361-363 IN denotes by
T1591 364-373 VBN denotes processed
T1592 373-374 -COMMA- denotes ,
T1593 375-387 JJ denotes complex-type
T1594 388-395 NNS denotes glycans
R1562 T1557 T1555 arg1Of protein,the
R1563 T1557 T1556 arg1Of protein,S
R1564 T1560 T1558 arg1Of contain,","
R1565 T1559 T1560 arg1Of 8,contain
R1566 T1562 T1560 arg2Of populations,contain
R1567 T1562 T1561 arg1Of populations,substantial
R1568 T1562 T1563 arg1Of populations,of
R1589 T1583 T1581 arg3Of ),(
R1590 T1587 T1584 arg1Of sites,The
R1591 T1587 T1585 arg1Of sites,remaining
R1592 T1587 T1586 arg1Of sites,14
R1593 T1587 T1588 arg1Of sites,are
R1594 T1589 T1588 arg2Of dominated,are
R1595 T1594 T1589 arg1Of glycans,dominated
R1596 T1587 T1589 arg2Of sites,dominated
R1597 T1594 T1590 arg2Of glycans,by
R1598 T1594 T1591 arg1Of glycans,processed
R1599 T1591 T1592 arg1Of processed,","
R1600 T1593 T1592 arg2Of complex-type,","
R1601 T1594 T1593 arg1Of glycans,complex-type
R1526 T1523 T1522 arg1Of mixture,A
R1527 T1523 T1524 arg1Of mixture,of
R1528 T1528 T1524 arg2Of glycans,of
R1529 T1528 T1525 arg1Of glycans,oligomannose-
R1530 T1525 T1526 arg1Of oligomannose-,and
R1531 T1527 T1526 arg2Of complex-type,and
R1532 T1528 T1527 arg1Of glycans,complex-type
R1533 T1523 T1529 arg1Of mixture,can
R1534 T1531 T1529 arg2Of found,can
R1535 T1523 T1530 arg1Of mixture,be
R1536 T1531 T1530 arg2Of found,be
R1537 T1523 T1531 arg2Of mixture,found
R1538 T1531 T1532 arg1Of found,at
R1539 T1544 T1532 arg2Of and,at
R1540 T1541 T1533 arg1Of ",",sites
R1541 T1534 T1535 arg1Of N61,","
R1542 T1536 T1535 arg2Of N122,","
R1543 T1535 T1537 arg1Of ",",","
R1544 T1538 T1537 arg2Of N603,","
R1545 T1537 T1539 arg1Of ",",","
R1546 T1540 T1539 arg2Of N717,","
R1547 T1539 T1541 arg1Of ",",","
R1548 T1542 T1541 arg2Of N801,","
R1549 T1544 T1543 arg1Of and,","
R1550 T1541 T1544 arg1Of ",",and
R1551 T1545 T1544 arg2Of N1074,and
R1552 T1545 T1546 arg1Of N1074,(
R1553 T1547 T1546 arg2Of Fig.,(
R1554 T1549 T1546 arg3Of ),(
R1555 T1547 T1548 arg1Of Fig.,2
R1556 T1560 T1550 arg1Of contain,Of
R1557 T1553 T1550 arg2Of sites,Of
R1558 T1553 T1551 arg1Of sites,the
R1559 T1553 T1552 arg1Of sites,22
R1560 T1553 T1554 arg1Of sites,on
R1561 T1557 T1554 arg2Of protein,on
R1569 T1565 T1563 arg2Of glycans,of
R1570 T1565 T1564 arg1Of glycans,oligomannose-type
R1571 T1560 T1566 arg1Of contain,","
R1572 T1568 T1567 arg2Of how,highlighting
R1573 T1560 T1567 modOf contain,highlighting
R1574 T1576 T1568 arg1Of is,how
R1575 T1570 T1569 arg1Of processing,the
R1576 T1570 T1571 arg1Of processing,of
R1577 T1575 T1571 arg2Of glycans,of
R1578 T1575 T1572 arg1Of glycans,the
R1579 T1575 T1573 arg1Of glycans,SARS-CoV-2
R1580 T1575 T1574 arg1Of glycans,S
R1581 T1570 T1576 arg1Of processing,is
R1582 T1577 T1576 arg2Of divergent,is
R1583 T1570 T1577 arg1Of processing,divergent
R1584 T1577 T1578 arg1Of divergent,from
R1585 T1580 T1578 arg2Of glycoproteins,from
R1586 T1580 T1579 arg1Of glycoproteins,host
R1587 T1580 T1581 arg1Of glycoproteins,(
R1588 T1582 T1581 arg2Of 25,(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T51 148-155 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T52 304-317 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T70 2-9 Chemical denotes mixture http://purl.obolibrary.org/obo/CHEBI_60004
T71 44-51 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T72 148-155 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T73 212-219 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T74 273-280 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T75 304-317 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T76 388-395 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T35 260-270 Species denotes SARS-CoV-2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T63 0-122 Sentence denotes A mixture of oligomannose- and complex-type glycans can be found at sites N61, N122, N603, N717, N801, and N1074 (Fig. 2).
T64 123-323 Sentence denotes Of the 22 sites on the S protein, 8 contain substantial populations of oligomannose-type glycans, highlighting how the processing of the SARS-CoV-2 S glycans is divergent from host glycoproteins (25).
T65 324-396 Sentence denotes The remaining 14 sites are dominated by processed, complex-type glycans.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 260-270 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
305 74-77 Gene denotes N61 Gene:51306
306 271-272 Gene denotes S Gene:43740568
307 260-270 Species denotes SARS-CoV-2 Tax:2697049
308 13-25 Chemical denotes oligomannose
309 44-51 Chemical denotes glycans MESH:D011134
310 194-206 Chemical denotes oligomannose
311 212-219 Chemical denotes glycans MESH:D011134
312 273-280 Chemical denotes glycans MESH:D011134
313 388-395 Chemical denotes glycans MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1083 146-155 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T1116 304-317 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T63 0-122 Sentence denotes A mixture of oligomannose- and complex-type glycans can be found at sites N61, N122, N603, N717, N801, and N1074 (Fig. 2).
T64 123-323 Sentence denotes Of the 22 sites on the S protein, 8 contain substantial populations of oligomannose-type glycans, highlighting how the processing of the SARS-CoV-2 S glycans is divergent from host glycoproteins (25).
T65 324-396 Sentence denotes The remaining 14 sites are dominated by processed, complex-type glycans.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
305 74-77 Gene denotes N61 Gene:51306
306 271-272 Gene denotes S Gene:43740568
307 260-270 Species denotes SARS-CoV-2 Tax:2697049
308 13-25 Chemical denotes oligomannose
309 44-51 Chemical denotes glycans MESH:D011134
310 194-206 Chemical denotes oligomannose
311 212-219 Chemical denotes glycans MESH:D011134
312 273-280 Chemical denotes glycans MESH:D011134
313 388-395 Chemical denotes glycans MESH:D011134