PMC:7199903 / 817-936
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":"A mass spectrometry analysis reveals the glycan composition at all glycosylation sites on the SARS-CoV-2 spike protein.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T7","span":{"begin":111,"end":118},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T7","span":{"begin":94,"end":102},"obj":"Disease"}],"attributes":[{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T9","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T9","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T5","span":{"begin":111,"end":118},"obj":"Chemical"}],"attributes":[{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T10","span":{"begin":81,"end":86},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T122","span":{"begin":0,"end":1},"obj":"DT"},{"id":"T123","span":{"begin":2,"end":6},"obj":"NN"},{"id":"T124","span":{"begin":7,"end":19},"obj":"NN"},{"id":"T125","span":{"begin":20,"end":28},"obj":"NN"},{"id":"T126","span":{"begin":29,"end":36},"obj":"VBZ"},{"id":"T127","span":{"begin":37,"end":40},"obj":"DT"},{"id":"T128","span":{"begin":41,"end":47},"obj":"NN"},{"id":"T129","span":{"begin":48,"end":59},"obj":"NN"},{"id":"T130","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T131","span":{"begin":63,"end":66},"obj":"DT"},{"id":"T132","span":{"begin":67,"end":80},"obj":"NN"},{"id":"T133","span":{"begin":81,"end":86},"obj":"NNS"},{"id":"T134","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T135","span":{"begin":90,"end":93},"obj":"DT"},{"id":"T136","span":{"begin":94,"end":104},"obj":"NN"},{"id":"T137","span":{"begin":105,"end":110},"obj":"NN"},{"id":"T138","span":{"begin":111,"end":118},"obj":"NN"}],"relations":[{"id":"R126","pred":"arg1Of","subj":"T125","obj":"T122"},{"id":"R127","pred":"arg1Of","subj":"T125","obj":"T123"},{"id":"R128","pred":"arg1Of","subj":"T125","obj":"T124"},{"id":"R129","pred":"arg1Of","subj":"T125","obj":"T126"},{"id":"R130","pred":"arg2Of","subj":"T129","obj":"T126"},{"id":"R131","pred":"arg1Of","subj":"T129","obj":"T127"},{"id":"R132","pred":"arg1Of","subj":"T129","obj":"T128"},{"id":"R133","pred":"arg1Of","subj":"T129","obj":"T130"},{"id":"R134","pred":"arg2Of","subj":"T133","obj":"T130"},{"id":"R135","pred":"arg1Of","subj":"T133","obj":"T131"},{"id":"R136","pred":"arg1Of","subj":"T133","obj":"T132"},{"id":"R137","pred":"arg1Of","subj":"T133","obj":"T134"},{"id":"R138","pred":"arg2Of","subj":"T138","obj":"T134"},{"id":"R139","pred":"arg1Of","subj":"T138","obj":"T135"},{"id":"R140","pred":"arg1Of","subj":"T138","obj":"T136"},{"id":"R141","pred":"arg1Of","subj":"T138","obj":"T137"}],"attributes":[{"subj":"T122","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T123","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T124","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T125","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T126","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T127","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T128","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T129","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T130","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T131","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T132","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T133","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T134","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T135","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T136","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T137","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T138","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T7","span":{"begin":111,"end":118},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T7","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T4","span":{"begin":111,"end":118},"obj":"Chemical"}],"attributes":[{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T5","span":{"begin":94,"end":104},"obj":"Species"}],"attributes":[{"id":"A5","pred":"ncbi_taxonomy_id","subj":"T5","obj":"NCBItxid:2697049"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T10","span":{"begin":0,"end":119},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T6","span":{"begin":94,"end":104},"obj":"Disease"}],"attributes":[{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T6","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"29","span":{"begin":105,"end":110},"obj":"Gene"},{"id":"30","span":{"begin":94,"end":104},"obj":"Species"},{"id":"31","span":{"begin":41,"end":47},"obj":"Chemical"}],"attributes":[{"id":"A29","pred":"pubann:denotes","subj":"29","obj":"Gene:43740568"},{"id":"A30","pred":"pubann:denotes","subj":"30","obj":"Tax:2697049"},{"id":"A31","pred":"pubann:denotes","subj":"31","obj":"MESH:D011134"},{"subj":"29","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"30","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"31","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3","span":{"begin":105,"end":118},"obj":"Protein"}],"attributes":[{"id":"A3","pred":"uniprot_id","subj":"T3","obj":"https://www.uniprot.org/uniprot/P31340"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T2","span":{"begin":67,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-GO-BP-0"}]},{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T2","span":{"begin":67,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-sample-GO-BP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T2","span":{"begin":67,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T10","span":{"begin":0,"end":119},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T10","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"29","span":{"begin":105,"end":110},"obj":"Gene"},{"id":"30","span":{"begin":94,"end":104},"obj":"Species"},{"id":"31","span":{"begin":41,"end":47},"obj":"Chemical"}],"attributes":[{"id":"A29","pred":"tao:has_database_id","subj":"29","obj":"Gene:43740568"},{"id":"A30","pred":"tao:has_database_id","subj":"30","obj":"Tax:2697049"},{"id":"A31","pred":"tao:has_database_id","subj":"31","obj":"MESH:D011134"},{"subj":"29","pred":"source","obj":"LitCovid-PubTator"},{"subj":"30","pred":"source","obj":"LitCovid-PubTator"},{"subj":"31","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec9793","default":true},{"id":"LitCovid-PD-MONDO","color":"#93a8ec"},{"id":"LitCovid-PD-CLO","color":"#c2ec93"},{"id":"LitCovid-PD-CHEBI","color":"#ec93dc"},{"id":"LitCovid-sample-PD-IDO","color":"#93ece2"},{"id":"LitCovid-sample-Enju","color":"#ecc893"},{"id":"LitCovid-sample-PD-FMA","color":"#ae93ec"},{"id":"LitCovid-sample-CHEBI","color":"#93ec94"},{"id":"LitCovid-sample-PD-NCBITaxon","color":"#ec93ac"},{"id":"LitCovid-sample-sentences","color":"#93c6ec"},{"id":"LitCovid-sample-PD-MONDO","color":"#e0ec93"},{"id":"LitCovid-sample-Pubtator","color":"#de93ec"},{"id":"LitCovid-sample-UniProt","color":"#93ecc4"},{"id":"LitCovid-sample-PD-GO-BP-0","color":"#ecaa93"},{"id":"LitCovid-sample-GO-BP","color":"#9395ec"},{"id":"LitCovid-PD-GO-BP","color":"#afec93"},{"id":"LitCovid-sentences","color":"#ec93c9"},{"id":"LitCovid-PubTator","color":"#93e4ec"}]}]}}