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PMC:7199903 / 5733-6049 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T35 135-142 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T36 201-207 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T37 219-224 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T38 272-277 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 201-207 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 122-130 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T42 64-65 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T43 185-190 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T44 191-207 http://www.ebi.ac.uk/efo/EFO_0000927 denotes embryonic kidney
T45 214-224 http://purl.obolibrary.org/obo/CLO_0054159 denotes 293F cells
T46 272-277 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 27-29 Chemical denotes CD http://purl.obolibrary.org/obo/CHEBI_8673
T58 58-60 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T60 67-70 Chemical denotes SDS http://purl.obolibrary.org/obo/CHEBI_8984
T61 71-85 Chemical denotes polyacrylamide http://purl.obolibrary.org/obo/CHEBI_51135|http://purl.obolibrary.org/obo/CHEBI_53656|http://purl.obolibrary.org/obo/CHEBI_60766
T64 135-142 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T30 219-224 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T31 272-277 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T948 3-4 -LRB- denotes (
T949 4-6 NN denotes CH
T950 6-7 -RRB- denotes )
T951 7-8 -COMMA- denotes ,
T952 9-18 NN denotes connector
T953 19-25 NN denotes domain
T954 26-27 -LRB- denotes (
T955 27-29 NN denotes CD
T956 29-30 -RRB- denotes )
T957 30-31 -COMMA- denotes ,
T958 32-35 CC denotes and
T959 36-49 JJ denotes transmembrane
T960 50-56 NN denotes domain
T961 57-58 -LRB- denotes (
T962 58-60 NN denotes TM
T963 60-61 -RRB- denotes )
T964 63-64 -LRB- denotes (
T965 64-65 NN denotes B
T966 65-66 -RRB- denotes )
T967 67-85 NN denotes SDS–polyacrylamide
T968 86-89 NN denotes gel
T969 90-105 NN denotes electrophoresis
T970 106-114 NN denotes analysis
T971 115-117 IN denotes of
T972 118-121 DT denotes the
T973 122-132 NN denotes SARS-CoV-2
T974 133-134 NN denotes S
T975 135-142 NN denotes protein
T976 143-144 -LRB- denotes (
T977 144-153 VBN denotes indicated
T978 154-156 IN denotes by
T979 157-160 DT denotes the
T980 161-170 NN denotes arrowhead
T981 170-171 -RRB- denotes )
T982 172-181 VBN denotes expressed
T983 182-184 IN denotes in
T984 185-190 JJ denotes human
T985 191-200 JJ denotes embryonic
T986 201-207 NN denotes kidney
T987 208-209 -LRB- denotes (
T988 209-212 NN denotes HEK
T989 212-213 -RRB- denotes )
T990 214-218 NN denotes 293F
T991 219-224 NNS denotes cells
T992 226-230 NN denotes Lane
T993 231-232 CD denotes 1
T994 232-233 -COLON- denotes :
T995 234-242 VBN denotes filtered
T996 243-254 NN denotes supernatant
T997 255-259 IN denotes from
T998 260-271 VBN denotes transfected
T999 272-277 NNS denotes cells
T1000 277-278 -SEMICOLON- denotes ;
T1001 279-283 NN denotes lane
T1002 284-285 CD denotes 2
T1003 285-286 -COLON- denotes :
T1004 287-299 NN denotes flow-through
T1005 300-304 IN denotes from
T1006 305-316 NN denotes StrepTactin
R952 T949 T948 arg2Of CH,(
R984 T980 T979 arg1Of arrowhead,the
R985 T970 T982 arg2Of analysis,expressed
R986 T982 T983 arg1Of expressed,in
R987 T991 T983 arg2Of cells,in
R988 T991 T984 arg1Of cells,human
R989 T991 T985 arg1Of cells,embryonic
R990 T991 T986 arg1Of cells,kidney
R991 T991 T987 arg1Of cells,(
R953 T950 T948 arg3Of ),(
R955 T953 T951 arg2Of domain,","
R956 T953 T952 arg1Of domain,connector
R957 T953 T954 arg1Of domain,(
R958 T955 T954 arg2Of CD,(
R959 T956 T954 arg3Of ),(
R960 T958 T957 arg1Of and,","
R961 T951 T958 arg1Of ",",and
R962 T960 T958 arg2Of domain,and
R963 T960 T959 arg1Of domain,transmembrane
R964 T960 T961 arg1Of domain,(
R965 T962 T961 arg2Of TM,(
R966 T963 T961 arg3Of ),(
R967 T958 T964 arg1Of and,(
R968 T965 T964 arg2Of B,(
R969 T966 T964 arg3Of ),(
R971 T970 T967 arg2Of analysis,SDS–polyacrylamide
R972 T970 T968 arg1Of analysis,gel
R973 T970 T969 arg1Of analysis,electrophoresis
R974 T970 T971 arg1Of analysis,of
R975 T975 T971 arg2Of protein,of
R976 T975 T972 arg1Of protein,the
R977 T975 T973 arg1Of protein,SARS-CoV-2
R978 T975 T974 arg1Of protein,S
R979 T975 T976 arg1Of protein,(
R980 T977 T976 arg2Of indicated,(
R981 T981 T976 arg3Of ),(
R982 T980 T977 arg1Of arrowhead,indicated
R983 T980 T978 arg2Of arrowhead,by
R992 T988 T987 arg2Of HEK,(
R993 T989 T987 arg3Of ),(
R994 T991 T990 arg1Of cells,293F
R995 T992 T993 arg1Of Lane,1
R996 T992 T994 arg1Of Lane,:
R997 T996 T994 arg2Of supernatant,:
R998 T996 T995 arg2Of supernatant,filtered
R999 T996 T997 arg1Of supernatant,from
R1000 T999 T997 arg2Of cells,from
R1001 T999 T998 arg2Of cells,transfected
R1002 T996 T1000 arg1Of supernatant,;
R1003 T1001 T1000 arg2Of lane,;
R1004 T1001 T1002 arg1Of lane,2
R1005 T1001 T1003 arg1Of lane,:
R1006 T1005 T1004 arg1Of from,flow-through
R1007 T1001 T1005 arg1Of lane,from

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T35 135-142 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T36 201-207 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T37 219-224 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T38 272-277 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T43 67-70 Chemical denotes SDS http://purl.obolibrary.org/obo/CHEBI_8984
T44 71-85 Chemical denotes polyacrylamide http://purl.obolibrary.org/obo/CHEBI_51135|http://purl.obolibrary.org/obo/CHEBI_53656|http://purl.obolibrary.org/obo/CHEBI_60766
T47 135-142 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T25 122-132 Species denotes SARS-CoV-2 NCBItxid:2697049
T26 185-190 Species denotes human NCBItxid:9606

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 201-207 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T25 122-132 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
173 133-142 Gene denotes S protein Gene:43740568
178 122-132 Species denotes SARS-CoV-2 Tax:2697049
179 185-190 Species denotes human Tax:9606
187 67-85 Chemical denotes SDS–polyacrylamide
188 191-207 Disease denotes embryonic kidney MESH:D007674
189 209-218 CellLine denotes HEK) 293F CVCL:6642

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T617 133-142 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T650 191-200 Protein denotes embryonic https://www.uniprot.org/uniprot/P02301
T651 209-212 Protein denotes HEK https://www.uniprot.org/uniprot/Q9H2V4|https://www.uniprot.org/uniprot/Q9H2V3|https://www.uniprot.org/uniprot/P29320

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T1 201-207 http://purl.obolibrary.org/obo/MAT_0000119 denotes kidney

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
173 133-142 Gene denotes S protein Gene:43740568
178 122-132 Species denotes SARS-CoV-2 Tax:2697049
179 185-190 Species denotes human Tax:9606
187 67-85 Chemical denotes SDS–polyacrylamide
188 191-207 Disease denotes embryonic kidney MESH:D007674
189 209-218 CellLine denotes HEK) 293F CVCL:6642