PMC:7199903 / 4125-4368
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T25 | 22-38 | Body_part | denotes | germinal centers | http://purl.org/sig/ont/fma/fma55224 |
T26 | 108-115 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T27 | 172-179 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 22-38 | Body_part | denotes | germinal centers | http://purl.obolibrary.org/obo/UBERON_0010754 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T22 | 95-103 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T25 | 9-18 | Chemical | denotes | immunogen | http://purl.obolibrary.org/obo/CHEBI_60816 |
T26 | 108-115 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T27 | 172-179 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T27 | 60-64 | http://purl.obolibrary.org/obo/BFO_0000029 | denotes | site |
T28 | 232-242 | http://purl.obolibrary.org/obo/IDO_0000608 | denotes | replicates |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T664 | 9-18 | NN | denotes | immunogen |
T665 | 19-21 | TO | denotes | to |
T666 | 22-30 | JJ | denotes | germinal |
T667 | 31-38 | NNS | denotes | centers |
T668 | 39-40 | -LRB- | denotes | ( |
T669 | 40-42 | CD | denotes | 19 |
T670 | 42-43 | -RRB- | denotes | ) |
T671 | 45-47 | TO | denotes | To |
T672 | 48-55 | VB | denotes | resolve |
T673 | 56-59 | DT | denotes | the |
T674 | 60-73 | JJ | denotes | site-specific |
T675 | 74-87 | NN | denotes | glycosylation |
T676 | 88-90 | IN | denotes | of |
T677 | 91-94 | DT | denotes | the |
T678 | 95-105 | NN | denotes | SARS-CoV-2 |
T679 | 106-107 | NN | denotes | S |
T680 | 108-115 | NN | denotes | protein |
T681 | 116-119 | CC | denotes | and |
T682 | 120-129 | VB | denotes | visualize |
T683 | 130-133 | DT | denotes | the |
T684 | 134-146 | NN | denotes | distribution |
T685 | 147-149 | IN | denotes | of |
T686 | 150-160 | NNS | denotes | glycoforms |
T687 | 161-167 | IN | denotes | across |
T688 | 168-171 | DT | denotes | the |
T689 | 172-179 | NN | denotes | protein |
T690 | 180-187 | NN | denotes | surface |
T691 | 187-188 | -COMMA- | denotes | , |
T692 | 189-191 | PRP | denotes | we |
T693 | 192-201 | VBD | denotes | expressed |
T694 | 202-205 | CC | denotes | and |
T695 | 206-214 | VBN | denotes | purified |
T696 | 215-220 | CD | denotes | three |
T697 | 221-231 | JJ | denotes | biological |
T698 | 232-242 | NNS | denotes | replicates |
R667 | T664 | T665 | arg1Of | immunogen,to |
R668 | T667 | T665 | arg2Of | centers,to |
R669 | T667 | T666 | arg1Of | centers,germinal |
R670 | T667 | T668 | arg1Of | centers,( |
R671 | T669 | T668 | arg2Of | 19,( |
R672 | T670 | T668 | arg3Of | ),( |
R673 | T681 | T671 | arg1Of | and,To |
R674 | T693 | T671 | modOf | expressed,To |
R675 | T692 | T672 | arg1Of | we,resolve |
R676 | T675 | T672 | arg2Of | glycosylation,resolve |
R677 | T675 | T673 | arg1Of | glycosylation,the |
R678 | T675 | T674 | arg1Of | glycosylation,site-specific |
R679 | T675 | T676 | arg1Of | glycosylation,of |
R680 | T680 | T676 | arg2Of | protein,of |
R681 | T680 | T677 | arg1Of | protein,the |
R682 | T680 | T678 | arg1Of | protein,SARS-CoV-2 |
R683 | T680 | T679 | arg1Of | protein,S |
R684 | T672 | T681 | arg1Of | resolve,and |
R685 | T682 | T681 | arg2Of | visualize,and |
R686 | T692 | T682 | arg1Of | we,visualize |
R687 | T684 | T682 | arg2Of | distribution,visualize |
R688 | T684 | T683 | arg1Of | distribution,the |
R689 | T684 | T685 | arg1Of | distribution,of |
R690 | T686 | T685 | arg2Of | glycoforms,of |
R691 | T684 | T687 | arg1Of | distribution,across |
R692 | T690 | T687 | arg2Of | surface,across |
R693 | T690 | T688 | arg1Of | surface,the |
R694 | T690 | T689 | arg1Of | surface,protein |
R695 | T693 | T691 | arg1Of | expressed,"," |
R696 | T692 | T693 | arg1Of | we,expressed |
R697 | T698 | T693 | arg2Of | replicates,expressed |
R698 | T698 | T694 | arg1Of | replicates,and |
R699 | T698 | T695 | arg2Of | replicates,purified |
R700 | T698 | T696 | arg1Of | replicates,three |
R701 | T698 | T697 | arg1Of | replicates,biological |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T25 | 22-38 | Body_part | denotes | germinal centers | http://purl.org/sig/ont/fma/fma55224 |
T26 | 108-115 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T27 | 172-179 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T22 | 108-115 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T23 | 172-179 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T20 | 95-105 | Species | denotes | SARS-CoV-2 | NCBItxid:2697049 |
LitCovid-sample-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 22-38 | Body_part | denotes | germinal centers | http://purl.obolibrary.org/obo/UBERON_0010754 |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T20 | 95-105 | Disease | denotes | SARS-CoV-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
140 | 106-115 | Gene | denotes | S protein | Gene:43740568 |
142 | 95-105 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T303 | 106-115 | Protein | denotes | S protein | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 74-87 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21 | 74-87 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 74-87 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
140 | 106-115 | Gene | denotes | S protein | Gene:43740568 |
142 | 95-105 | Species | denotes | SARS-CoV-2 | Tax:2697049 |