PMC:7199903 / 266-635 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":"rimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the virus can infect and could shield some epitopes from antibody neutralization. Watanabe et al. expressed and purified recombinant glycosylated spike trimers, proteolysed them to yield glycopeptides containing a single glycan, and determined the composition of the glyc","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T3","span":{"begin":92,"end":97},"obj":"Body_part"},{"id":"T4","span":{"begin":155,"end":163},"obj":"Body_part"},{"id":"T5","span":{"begin":285,"end":298},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma82784"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T2","span":{"begin":14,"end":17},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T3","span":{"begin":18,"end":20},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T4","span":{"begin":92,"end":97},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T5","span":{"begin":102,"end":107},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T6","span":{"begin":310,"end":311},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T3","span":{"begin":285,"end":298},"obj":"Chemical"}],"attributes":[{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_24396"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T3","span":{"begin":35,"end":40},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T4","span":{"begin":52,"end":57},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T5","span":{"begin":92,"end":97},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T6","span":{"begin":102,"end":107},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T7","span":{"begin":112,"end":118},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T6","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T7","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T39","span":{"begin":8,"end":13},"obj":"NN"},{"id":"T40","span":{"begin":14,"end":17},"obj":"VBZ"},{"id":"T41","span":{"begin":18,"end":20},"obj":"CD"},{"id":"T42","span":{"begin":21,"end":34},"obj":"NN"},{"id":"T43","span":{"begin":35,"end":40},"obj":"NNS"},{"id":"T44","span":{"begin":42,"end":45},"obj":"WRB"},{"id":"T45","span":{"begin":46,"end":51},"obj":"DT"},{"id":"T46","span":{"begin":52,"end":57},"obj":"NNS"},{"id":"T47","span":{"begin":58,"end":61},"obj":"VBP"},{"id":"T48","span":{"begin":62,"end":74},"obj":"VBN"},{"id":"T49","span":{"begin":75,"end":78},"obj":"MD"},{"id":"T50","span":{"begin":79,"end":85},"obj":"VB"},{"id":"T51","span":{"begin":86,"end":91},"obj":"WDT"},{"id":"T52","span":{"begin":92,"end":97},"obj":"NNS"},{"id":"T53","span":{"begin":98,"end":101},"obj":"DT"},{"id":"T54","span":{"begin":102,"end":107},"obj":"NN"},{"id":"T55","span":{"begin":108,"end":111},"obj":"MD"},{"id":"T56","span":{"begin":112,"end":118},"obj":"VB"},{"id":"T57","span":{"begin":119,"end":122},"obj":"CC"},{"id":"T58","span":{"begin":123,"end":128},"obj":"MD"},{"id":"T59","span":{"begin":129,"end":135},"obj":"VB"},{"id":"T60","span":{"begin":136,"end":140},"obj":"DT"},{"id":"T61","span":{"begin":141,"end":149},"obj":"NNS"},{"id":"T62","span":{"begin":150,"end":154},"obj":"IN"},{"id":"T63","span":{"begin":155,"end":163},"obj":"NN"},{"id":"T64","span":{"begin":164,"end":178},"obj":"NN"},{"id":"T65","span":{"begin":180,"end":188},"obj":"NNP"},{"id":"T66","span":{"begin":189,"end":191},"obj":"FW"},{"id":"T67","span":{"begin":192,"end":195},"obj":"FW"},{"id":"T68","span":{"begin":196,"end":205},"obj":"VBN"},{"id":"T69","span":{"begin":206,"end":209},"obj":"CC"},{"id":"T70","span":{"begin":210,"end":218},"obj":"VBN"},{"id":"T71","span":{"begin":219,"end":230},"obj":"JJ"},{"id":"T72","span":{"begin":231,"end":243},"obj":"VBN"},{"id":"T73","span":{"begin":244,"end":249},"obj":"NN"},{"id":"T74","span":{"begin":250,"end":257},"obj":"NNS"},{"id":"T75","span":{"begin":257,"end":258},"obj":"-COMMA-"},{"id":"T76","span":{"begin":259,"end":270},"obj":"VBD"},{"id":"T77","span":{"begin":271,"end":275},"obj":"PRP"},{"id":"T78","span":{"begin":276,"end":278},"obj":"TO"},{"id":"T79","span":{"begin":279,"end":284},"obj":"VB"},{"id":"T80","span":{"begin":285,"end":298},"obj":"NNS"},{"id":"T81","span":{"begin":299,"end":309},"obj":"VBG"},{"id":"T82","span":{"begin":310,"end":311},"obj":"DT"},{"id":"T83","span":{"begin":312,"end":318},"obj":"JJ"},{"id":"T84","span":{"begin":319,"end":325},"obj":"NN"},{"id":"T85","span":{"begin":325,"end":326},"obj":"-COMMA-"},{"id":"T86","span":{"begin":327,"end":330},"obj":"CC"},{"id":"T87","span":{"begin":331,"end":341},"obj":"VBD"},{"id":"T88","span":{"begin":342,"end":345},"obj":"DT"},{"id":"T89","span":{"begin":346,"end":357},"obj":"NN"},{"id":"T90","span":{"begin":358,"end":360},"obj":"IN"},{"id":"T91","span":{"begin":361,"end":364},"obj":"DT"}],"relations":[{"id":"R92","pred":"arg1Of","subj":"T89","obj":"T88"},{"id":"R93","pred":"arg1Of","subj":"T89","obj":"T90"},{"id":"R38","pred":"arg2Of","subj":"T43","obj":"T40"},{"id":"R39","pred":"arg1Of","subj":"T43","obj":"T41"},{"id":"R40","pred":"arg1Of","subj":"T43","obj":"T42"},{"id":"R41","pred":"arg1Of","subj":"T48","obj":"T44"},{"id":"R42","pred":"arg1Of","subj":"T46","obj":"T45"},{"id":"R43","pred":"arg1Of","subj":"T46","obj":"T47"},{"id":"R44","pred":"arg2Of","subj":"T48","obj":"T47"},{"id":"R45","pred":"arg2Of","subj":"T46","obj":"T48"},{"id":"R46","pred":"arg1Of","subj":"T44","obj":"T49"},{"id":"R47","pred":"arg2Of","subj":"T50","obj":"T49"},{"id":"R48","pred":"arg1Of","subj":"T44","obj":"T50"},{"id":"R49","pred":"arg2Of","subj":"T51","obj":"T50"},{"id":"R50","pred":"arg1Of","subj":"T52","obj":"T51"},{"id":"R51","pred":"arg1Of","subj":"T54","obj":"T53"},{"id":"R52","pred":"arg1Of","subj":"T54","obj":"T55"},{"id":"R53","pred":"arg2Of","subj":"T56","obj":"T55"},{"id":"R54","pred":"arg1Of","subj":"T54","obj":"T56"},{"id":"R55","pred":"arg2Of","subj":"T52","obj":"T56"},{"id":"R56","pred":"arg1Of","subj":"T50","obj":"T57"},{"id":"R57","pred":"arg2Of","subj":"T59","obj":"T57"},{"id":"R58","pred":"arg1Of","subj":"T44","obj":"T58"},{"id":"R59","pred":"arg2Of","subj":"T59","obj":"T58"},{"id":"R60","pred":"arg1Of","subj":"T44","obj":"T59"},{"id":"R61","pred":"arg2Of","subj":"T61","obj":"T59"},{"id":"R62","pred":"arg1Of","subj":"T61","obj":"T60"},{"id":"R63","pred":"arg1Of","subj":"T61","obj":"T62"},{"id":"R64","pred":"arg2Of","subj":"T64","obj":"T62"},{"id":"R65","pred":"arg1Of","subj":"T64","obj":"T63"},{"id":"R66","pred":"arg1Of","subj":"T74","obj":"T65"},{"id":"R67","pred":"arg1Of","subj":"T67","obj":"T66"},{"id":"R68","pred":"arg1Of","subj":"T65","obj":"T67"},{"id":"R69","pred":"arg2Of","subj":"T67","obj":"T68"},{"id":"R70","pred":"arg1Of","subj":"T68","obj":"T69"},{"id":"R71","pred":"arg2Of","subj":"T70","obj":"T69"},{"id":"R72","pred":"arg2Of","subj":"T67","obj":"T70"},{"id":"R73","pred":"arg1Of","subj":"T74","obj":"T71"},{"id":"R74","pred":"arg2Of","subj":"T74","obj":"T72"},{"id":"R75","pred":"arg1Of","subj":"T74","obj":"T73"},{"id":"R76","pred":"arg1Of","subj":"T86","obj":"T75"},{"id":"R77","pred":"arg1Of","subj":"T74","obj":"T76"},{"id":"R78","pred":"arg2Of","subj":"T77","obj":"T76"},{"id":"R79","pred":"arg3Of","subj":"T79","obj":"T76"},{"id":"R80","pred":"arg1Of","subj":"T79","obj":"T78"},{"id":"R81","pred":"arg1Of","subj":"T77","obj":"T79"},{"id":"R82","pred":"arg2Of","subj":"T80","obj":"T79"},{"id":"R83","pred":"arg1Of","subj":"T80","obj":"T81"},{"id":"R84","pred":"arg2Of","subj":"T84","obj":"T81"},{"id":"R85","pred":"arg1Of","subj":"T84","obj":"T82"},{"id":"R86","pred":"arg1Of","subj":"T84","obj":"T83"},{"id":"R87","pred":"arg1Of","subj":"T86","obj":"T85"},{"id":"R88","pred":"arg1Of","subj":"T76","obj":"T86"},{"id":"R89","pred":"arg2Of","subj":"T87","obj":"T86"},{"id":"R90","pred":"arg1Of","subj":"T74","obj":"T87"},{"id":"R91","pred":"arg2Of","subj":"T89","obj":"T87"}],"attributes":[{"subj":"T39","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T40","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T41","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T43","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T44","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T45","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T46","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T47","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T48","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T49","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T50","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T51","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T52","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T53","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T54","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T55","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T56","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T57","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T58","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T59","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T60","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T61","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T62","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T63","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T64","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T65","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T66","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T67","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T68","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T69","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T70","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T71","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T72","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T73","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T74","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T75","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T76","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T77","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T78","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T79","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T80","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T81","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T82","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T83","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T84","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T85","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T86","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T87","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T88","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T89","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T90","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T91","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T3","span":{"begin":92,"end":97},"obj":"Body_part"},{"id":"T4","span":{"begin":155,"end":163},"obj":"Body_part"},{"id":"T5","span":{"begin":285,"end":298},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma82784"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-PD-FMA"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-FMA"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T3","span":{"begin":285,"end":298},"obj":"Chemical"}],"attributes":[{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_24396"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T5","span":{"begin":42,"end":179},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T5","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"18","span":{"begin":244,"end":249},"obj":"Gene"},{"id":"21","span":{"begin":8,"end":13},"obj":"Gene"},{"id":"22","span":{"begin":285,"end":298},"obj":"Chemical"},{"id":"23","span":{"begin":319,"end":325},"obj":"Chemical"}],"attributes":[{"id":"A18","pred":"pubann:denotes","subj":"18","obj":"Gene:43740568"},{"id":"A21","pred":"pubann:denotes","subj":"21","obj":"Gene:43740568"},{"id":"A22","pred":"pubann:denotes","subj":"22","obj":"MESH:D006020"},{"id":"A23","pred":"pubann:denotes","subj":"23","obj":"MESH:D011134"},{"subj":"18","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"21","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"22","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"23","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T1","span":{"begin":21,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-PD-GO-BP-0"}]},{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T1","span":{"begin":21,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-GO-BP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":21,"end":34},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T5","span":{"begin":42,"end":179},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T5","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"18","span":{"begin":244,"end":249},"obj":"Gene"},{"id":"21","span":{"begin":8,"end":13},"obj":"Gene"},{"id":"22","span":{"begin":285,"end":298},"obj":"Chemical"},{"id":"23","span":{"begin":319,"end":325},"obj":"Chemical"}],"attributes":[{"id":"A18","pred":"tao:has_database_id","subj":"18","obj":"Gene:43740568"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Gene:43740568"},{"id":"A22","pred":"tao:has_database_id","subj":"22","obj":"MESH:D006020"},{"id":"A23","pred":"tao:has_database_id","subj":"23","obj":"MESH:D011134"},{"subj":"18","pred":"source","obj":"LitCovid-PubTator"},{"subj":"21","pred":"source","obj":"LitCovid-PubTator"},{"subj":"22","pred":"source","obj":"LitCovid-PubTator"},{"subj":"23","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ecdd93","default":true},{"id":"LitCovid-PD-CLO","color":"#c393ec"},{"id":"LitCovid-PD-CHEBI","color":"#93eca9"},{"id":"LitCovid-sample-PD-IDO","color":"#ec9397"},{"id":"LitCovid-sample-Enju","color":"#93b1ec"},{"id":"LitCovid-sample-PD-FMA","color":"#cbec93"},{"id":"LitCovid-sample-CHEBI","color":"#ec93e5"},{"id":"LitCovid-sample-sentences","color":"#93ecd9"},{"id":"LitCovid-sample-Pubtator","color":"#ecbf93"},{"id":"LitCovid-sample-PD-GO-BP-0","color":"#a593ec"},{"id":"LitCovid-sample-GO-BP","color":"#9aec93"},{"id":"LitCovid-PD-GO-BP","color":"#ec93b4"},{"id":"LitCovid-sentences","color":"#93ceec"},{"id":"LitCovid-PubTator","color":"#e8ec93"}]}]}}