PMC:7199903 / 190-496 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":" the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the virus can infect and could shield some epitopes from antibody neutralization. Watanabe et al. expressed and purified recombinant","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":20,"end":27},"obj":"Body_part"},{"id":"T3","span":{"begin":168,"end":173},"obj":"Body_part"},{"id":"T4","span":{"begin":231,"end":239},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T6","span":{"begin":43,"end":52},"obj":"Disease"}],"attributes":[{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T2","span":{"begin":90,"end":93},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T3","span":{"begin":94,"end":96},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T4","span":{"begin":168,"end":173},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T5","span":{"begin":178,"end":183},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":20,"end":27},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T2","span":{"begin":43,"end":52},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"},{"id":"T3","span":{"begin":111,"end":116},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T4","span":{"begin":128,"end":133},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T5","span":{"begin":168,"end":173},"obj":"http://purl.obolibrary.org/obo/CL_0000000"},{"id":"T6","span":{"begin":178,"end":183},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T7","span":{"begin":188,"end":194},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T6","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T7","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T27","span":{"begin":1,"end":4},"obj":"DT"},{"id":"T28","span":{"begin":5,"end":13},"obj":"JJ"},{"id":"T29","span":{"begin":14,"end":19},"obj":"NN"},{"id":"T30","span":{"begin":20,"end":27},"obj":"NN"},{"id":"T31","span":{"begin":28,"end":32},"obj":"WDT"},{"id":"T32","span":{"begin":33,"end":42},"obj":"VBZ"},{"id":"T33","span":{"begin":43,"end":52},"obj":"NN"},{"id":"T34","span":{"begin":54,"end":58},"obj":"DT"},{"id":"T35","span":{"begin":59,"end":67},"obj":"NN"},{"id":"T36","span":{"begin":68,"end":70},"obj":"IN"},{"id":"T37","span":{"begin":71,"end":74},"obj":"DT"},{"id":"T38","span":{"begin":75,"end":83},"obj":"JJ"},{"id":"T39","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T40","span":{"begin":90,"end":93},"obj":"VBZ"},{"id":"T41","span":{"begin":94,"end":96},"obj":"CD"},{"id":"T42","span":{"begin":97,"end":110},"obj":"NN"},{"id":"T43","span":{"begin":111,"end":116},"obj":"NNS"},{"id":"T44","span":{"begin":118,"end":121},"obj":"WRB"},{"id":"T45","span":{"begin":122,"end":127},"obj":"DT"},{"id":"T46","span":{"begin":128,"end":133},"obj":"NNS"},{"id":"T47","span":{"begin":134,"end":137},"obj":"VBP"},{"id":"T48","span":{"begin":138,"end":150},"obj":"VBN"},{"id":"T49","span":{"begin":151,"end":154},"obj":"MD"},{"id":"T50","span":{"begin":155,"end":161},"obj":"VB"},{"id":"T51","span":{"begin":162,"end":167},"obj":"WDT"},{"id":"T52","span":{"begin":168,"end":173},"obj":"NNS"},{"id":"T53","span":{"begin":174,"end":177},"obj":"DT"},{"id":"T54","span":{"begin":178,"end":183},"obj":"NN"},{"id":"T55","span":{"begin":184,"end":187},"obj":"MD"},{"id":"T56","span":{"begin":188,"end":194},"obj":"VB"},{"id":"T57","span":{"begin":195,"end":198},"obj":"CC"},{"id":"T58","span":{"begin":199,"end":204},"obj":"MD"},{"id":"T59","span":{"begin":205,"end":211},"obj":"VB"},{"id":"T60","span":{"begin":212,"end":216},"obj":"DT"},{"id":"T61","span":{"begin":217,"end":225},"obj":"NNS"},{"id":"T62","span":{"begin":226,"end":230},"obj":"IN"},{"id":"T63","span":{"begin":231,"end":239},"obj":"NN"},{"id":"T64","span":{"begin":240,"end":254},"obj":"NN"},{"id":"T65","span":{"begin":256,"end":264},"obj":"NNP"},{"id":"T66","span":{"begin":265,"end":267},"obj":"FW"},{"id":"T67","span":{"begin":268,"end":271},"obj":"FW"},{"id":"T68","span":{"begin":272,"end":281},"obj":"VBN"},{"id":"T69","span":{"begin":282,"end":285},"obj":"CC"},{"id":"T70","span":{"begin":286,"end":294},"obj":"VBN"},{"id":"T71","span":{"begin":295,"end":306},"obj":"JJ"}],"relations":[{"id":"R26","pred":"arg1Of","subj":"T30","obj":"T27"},{"id":"R27","pred":"arg1Of","subj":"T30","obj":"T28"},{"id":"R28","pred":"arg1Of","subj":"T30","obj":"T29"},{"id":"R29","pred":"arg1Of","subj":"T30","obj":"T31"},{"id":"R30","pred":"arg1Of","subj":"T30","obj":"T32"},{"id":"R31","pred":"arg2Of","subj":"T33","obj":"T32"},{"id":"R32","pred":"arg1Of","subj":"T35","obj":"T34"},{"id":"R33","pred":"arg1Of","subj":"T35","obj":"T36"},{"id":"R34","pred":"arg2Of","subj":"T39","obj":"T36"},{"id":"R35","pred":"arg1Of","subj":"T39","obj":"T37"},{"id":"R36","pred":"arg1Of","subj":"T39","obj":"T38"},{"id":"R37","pred":"arg1Of","subj":"T35","obj":"T40"},{"id":"R38","pred":"arg2Of","subj":"T43","obj":"T40"},{"id":"R39","pred":"arg1Of","subj":"T43","obj":"T41"},{"id":"R40","pred":"arg1Of","subj":"T43","obj":"T42"},{"id":"R41","pred":"arg1Of","subj":"T48","obj":"T44"},{"id":"R42","pred":"arg1Of","subj":"T46","obj":"T45"},{"id":"R43","pred":"arg1Of","subj":"T46","obj":"T47"},{"id":"R44","pred":"arg2Of","subj":"T48","obj":"T47"},{"id":"R45","pred":"arg2Of","subj":"T46","obj":"T48"},{"id":"R46","pred":"arg1Of","subj":"T44","obj":"T49"},{"id":"R47","pred":"arg2Of","subj":"T50","obj":"T49"},{"id":"R48","pred":"arg1Of","subj":"T44","obj":"T50"},{"id":"R49","pred":"arg2Of","subj":"T51","obj":"T50"},{"id":"R50","pred":"arg1Of","subj":"T52","obj":"T51"},{"id":"R51","pred":"arg1Of","subj":"T54","obj":"T53"},{"id":"R52","pred":"arg1Of","subj":"T54","obj":"T55"},{"id":"R53","pred":"arg2Of","subj":"T56","obj":"T55"},{"id":"R54","pred":"arg1Of","subj":"T54","obj":"T56"},{"id":"R55","pred":"arg2Of","subj":"T52","obj":"T56"},{"id":"R56","pred":"arg1Of","subj":"T50","obj":"T57"},{"id":"R57","pred":"arg2Of","subj":"T59","obj":"T57"},{"id":"R58","pred":"arg1Of","subj":"T44","obj":"T58"},{"id":"R59","pred":"arg2Of","subj":"T59","obj":"T58"},{"id":"R60","pred":"arg1Of","subj":"T44","obj":"T59"},{"id":"R61","pred":"arg2Of","subj":"T61","obj":"T59"},{"id":"R62","pred":"arg1Of","subj":"T61","obj":"T60"},{"id":"R63","pred":"arg1Of","subj":"T61","obj":"T62"},{"id":"R64","pred":"arg2Of","subj":"T64","obj":"T62"},{"id":"R65","pred":"arg1Of","subj":"T64","obj":"T63"},{"id":"R67","pred":"arg1Of","subj":"T67","obj":"T66"},{"id":"R68","pred":"arg1Of","subj":"T65","obj":"T67"},{"id":"R69","pred":"arg2Of","subj":"T67","obj":"T68"},{"id":"R70","pred":"arg1Of","subj":"T68","obj":"T69"},{"id":"R71","pred":"arg2Of","subj":"T70","obj":"T69"},{"id":"R72","pred":"arg2Of","subj":"T67","obj":"T70"}],"attributes":[{"subj":"T27","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T28","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T29","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T30","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T31","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T32","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T33","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T34","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T35","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T36","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T37","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T38","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T39","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T40","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T41","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T43","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T44","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T45","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T46","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T47","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T48","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T49","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T50","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T51","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T52","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T53","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T54","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T55","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T56","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T57","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T58","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T59","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T60","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T61","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T62","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T63","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T64","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T65","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T66","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T67","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T68","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T69","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T70","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T71","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T2","span":{"begin":20,"end":27},"obj":"Body_part"},{"id":"T3","span":{"begin":168,"end":173},"obj":"Body_part"},{"id":"T4","span":{"begin":231,"end":239},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-FMA"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-PD-FMA"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T2","span":{"begin":20,"end":27},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T4","span":{"begin":54,"end":117},"obj":"Sentence"},{"id":"T5","span":{"begin":118,"end":255},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T4","pred":"source","obj":"LitCovid-sample-sentences"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T5","span":{"begin":43,"end":52},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"17","span":{"begin":14,"end":19},"obj":"Gene"},{"id":"21","span":{"begin":84,"end":89},"obj":"Gene"},{"id":"25","span":{"begin":43,"end":52},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"pubann:denotes","subj":"17","obj":"Gene:43740568"},{"id":"A21","pred":"pubann:denotes","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"pubann:denotes","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"21","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"25","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2","span":{"begin":14,"end":27},"obj":"Protein"}],"attributes":[{"id":"A2","pred":"uniprot_id","subj":"T2","obj":"https://www.uniprot.org/uniprot/P31340"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T1","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-PD-GO-BP-0"}]},{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T1","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-GO-BP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":97,"end":110},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T4","span":{"begin":54,"end":117},"obj":"Sentence"},{"id":"T5","span":{"begin":118,"end":255},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T4","pred":"source","obj":"LitCovid-sentences"},{"subj":"T5","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"17","span":{"begin":14,"end":19},"obj":"Gene"},{"id":"21","span":{"begin":84,"end":89},"obj":"Gene"},{"id":"25","span":{"begin":43,"end":52},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"Gene:43740568"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-PubTator"},{"subj":"21","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93a2ec","default":true},{"id":"LitCovid-PD-MONDO","color":"#bcec93"},{"id":"LitCovid-PD-CLO","color":"#ec93d6"},{"id":"LitCovid-PD-CHEBI","color":"#93ece8"},{"id":"LitCovid-sample-PD-IDO","color":"#ecce93"},{"id":"LitCovid-sample-Enju","color":"#b493ec"},{"id":"LitCovid-sample-PD-FMA","color":"#93ec9a"},{"id":"LitCovid-sample-CHEBI","color":"#ec93a6"},{"id":"LitCovid-sample-sentences","color":"#93c0ec"},{"id":"LitCovid-sample-PD-MONDO","color":"#daec93"},{"id":"LitCovid-sample-Pubtator","color":"#e493ec"},{"id":"LitCovid-sample-UniProt","color":"#93ecca"},{"id":"LitCovid-sample-PD-GO-BP-0","color":"#ecb093"},{"id":"LitCovid-sample-GO-BP","color":"#9693ec"},{"id":"LitCovid-PD-GO-BP","color":"#a9ec93"},{"id":"LitCovid-sentences","color":"#ec93c3"},{"id":"LitCovid-PubTator","color":"#93deec"}]}]}}