PMC:7199903 / 175-340 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":") is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":35,"end":42},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T6","span":{"begin":58,"end":67},"obj":"Disease"}],"attributes":[{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":2,"end":12},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"},{"id":"T2","span":{"begin":105,"end":108},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T3","span":{"begin":109,"end":111},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":35,"end":42},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T2","span":{"begin":58,"end":67},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"},{"id":"T3","span":{"begin":126,"end":131},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T4","span":{"begin":143,"end":148},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T3","pred":"source","obj":"LitCovid-sample-PD-IDO"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T23","span":{"begin":0,"end":1},"obj":"-RRB-"},{"id":"T24","span":{"begin":2,"end":4},"obj":"VBZ"},{"id":"T25","span":{"begin":5,"end":12},"obj":"VBN"},{"id":"T26","span":{"begin":13,"end":15},"obj":"IN"},{"id":"T27","span":{"begin":16,"end":19},"obj":"DT"},{"id":"T28","span":{"begin":20,"end":28},"obj":"JJ"},{"id":"T29","span":{"begin":29,"end":34},"obj":"NN"},{"id":"T30","span":{"begin":35,"end":42},"obj":"NN"},{"id":"T31","span":{"begin":43,"end":47},"obj":"WDT"},{"id":"T32","span":{"begin":48,"end":57},"obj":"VBZ"},{"id":"T33","span":{"begin":58,"end":67},"obj":"NN"},{"id":"T34","span":{"begin":69,"end":73},"obj":"DT"},{"id":"T35","span":{"begin":74,"end":82},"obj":"NN"},{"id":"T36","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T37","span":{"begin":86,"end":89},"obj":"DT"},{"id":"T38","span":{"begin":90,"end":98},"obj":"JJ"},{"id":"T39","span":{"begin":99,"end":104},"obj":"NN"},{"id":"T40","span":{"begin":105,"end":108},"obj":"VBZ"},{"id":"T41","span":{"begin":109,"end":111},"obj":"CD"},{"id":"T42","span":{"begin":112,"end":125},"obj":"NN"},{"id":"T43","span":{"begin":126,"end":131},"obj":"NNS"},{"id":"T44","span":{"begin":133,"end":136},"obj":"WRB"},{"id":"T45","span":{"begin":137,"end":142},"obj":"DT"},{"id":"T46","span":{"begin":143,"end":148},"obj":"NNS"},{"id":"T47","span":{"begin":149,"end":152},"obj":"VBP"},{"id":"T48","span":{"begin":153,"end":165},"obj":"VBN"}],"relations":[{"id":"R22","pred":"arg2Of","subj":"T25","obj":"T24"},{"id":"R24","pred":"arg1Of","subj":"T25","obj":"T26"},{"id":"R25","pred":"arg2Of","subj":"T30","obj":"T26"},{"id":"R26","pred":"arg1Of","subj":"T30","obj":"T27"},{"id":"R27","pred":"arg1Of","subj":"T30","obj":"T28"},{"id":"R28","pred":"arg1Of","subj":"T30","obj":"T29"},{"id":"R29","pred":"arg1Of","subj":"T30","obj":"T31"},{"id":"R30","pred":"arg1Of","subj":"T30","obj":"T32"},{"id":"R31","pred":"arg2Of","subj":"T33","obj":"T32"},{"id":"R32","pred":"arg1Of","subj":"T35","obj":"T34"},{"id":"R33","pred":"arg1Of","subj":"T35","obj":"T36"},{"id":"R34","pred":"arg2Of","subj":"T39","obj":"T36"},{"id":"R35","pred":"arg1Of","subj":"T39","obj":"T37"},{"id":"R36","pred":"arg1Of","subj":"T39","obj":"T38"},{"id":"R37","pred":"arg1Of","subj":"T35","obj":"T40"},{"id":"R38","pred":"arg2Of","subj":"T43","obj":"T40"},{"id":"R39","pred":"arg1Of","subj":"T43","obj":"T41"},{"id":"R40","pred":"arg1Of","subj":"T43","obj":"T42"},{"id":"R41","pred":"arg1Of","subj":"T48","obj":"T44"},{"id":"R42","pred":"arg1Of","subj":"T46","obj":"T45"},{"id":"R43","pred":"arg1Of","subj":"T46","obj":"T47"},{"id":"R44","pred":"arg2Of","subj":"T48","obj":"T47"},{"id":"R45","pred":"arg2Of","subj":"T46","obj":"T48"}],"attributes":[{"subj":"T23","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T24","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T25","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T26","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T27","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T28","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T29","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T30","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T31","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T32","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T33","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T34","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T35","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T36","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T37","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T38","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T39","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T40","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T41","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T43","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T44","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T45","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T46","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T47","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T48","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T2","span":{"begin":35,"end":42},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T2","span":{"begin":35,"end":42},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T4","span":{"begin":69,"end":132},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T4","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T5","span":{"begin":58,"end":67},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"17","span":{"begin":29,"end":34},"obj":"Gene"},{"id":"21","span":{"begin":99,"end":104},"obj":"Gene"},{"id":"25","span":{"begin":58,"end":67},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"pubann:denotes","subj":"17","obj":"Gene:43740568"},{"id":"A21","pred":"pubann:denotes","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"pubann:denotes","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"21","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"25","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2","span":{"begin":29,"end":42},"obj":"Protein"}],"attributes":[{"id":"A2","pred":"uniprot_id","subj":"T2","obj":"https://www.uniprot.org/uniprot/P31340"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T1","span":{"begin":112,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-PD-GO-BP-0"}]},{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T1","span":{"begin":112,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-sample-GO-BP"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":112,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T4","span":{"begin":69,"end":132},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T4","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"17","span":{"begin":29,"end":34},"obj":"Gene"},{"id":"21","span":{"begin":99,"end":104},"obj":"Gene"},{"id":"25","span":{"begin":58,"end":67},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"Gene:43740568"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-PubTator"},{"subj":"21","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#9693ec","default":true},{"id":"LitCovid-PD-MONDO","color":"#aaec93"},{"id":"LitCovid-PD-CLO","color":"#ec93c4"},{"id":"LitCovid-PD-CHEBI","color":"#93deec"},{"id":"LitCovid-sample-PD-IDO","color":"#ece093"},{"id":"LitCovid-sample-Enju","color":"#c693ec"},{"id":"LitCovid-sample-PD-FMA","color":"#93ecac"},{"id":"LitCovid-sample-CHEBI","color":"#ec9393"},{"id":"LitCovid-sample-sentences","color":"#93adec"},{"id":"LitCovid-sample-PD-MONDO","color":"#c7ec93"},{"id":"LitCovid-sample-Pubtator","color":"#ec93e1"},{"id":"LitCovid-sample-UniProt","color":"#93ecdc"},{"id":"LitCovid-sample-PD-GO-BP-0","color":"#ecc293"},{"id":"LitCovid-sample-GO-BP","color":"#a893ec"},{"id":"LitCovid-PD-GO-BP","color":"#97ec93"},{"id":"LitCovid-sentences","color":"#ec93b1"},{"id":"LitCovid-PubTator","color":"#93cbec"}]}]}}