PMC:7199903 / 156-370
Annnotations
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":54,"end":61},"obj":"Body_part"},{"id":"T3","span":{"begin":202,"end":207},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-PD-MONDO
{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T5","span":{"begin":9,"end":17},"obj":"Disease"},{"id":"T6","span":{"begin":77,"end":86},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":21,"end":31},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"},{"id":"T2","span":{"begin":124,"end":127},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T3","span":{"begin":128,"end":130},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T4","span":{"begin":202,"end":207},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":54,"end":61},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-PD-IDO
{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T2","span":{"begin":77,"end":86},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"},{"id":"T3","span":{"begin":145,"end":150},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T4","span":{"begin":162,"end":167},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"},{"id":"T5","span":{"begin":202,"end":207},"obj":"http://purl.obolibrary.org/obo/CL_0000000"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T20","span":{"begin":6,"end":7},"obj":"CD"},{"id":"T21","span":{"begin":8,"end":9},"obj":"-LRB-"},{"id":"T22","span":{"begin":9,"end":19},"obj":"NN"},{"id":"T23","span":{"begin":19,"end":20},"obj":"-RRB-"},{"id":"T24","span":{"begin":21,"end":23},"obj":"VBZ"},{"id":"T25","span":{"begin":24,"end":31},"obj":"VBN"},{"id":"T26","span":{"begin":32,"end":34},"obj":"IN"},{"id":"T27","span":{"begin":35,"end":38},"obj":"DT"},{"id":"T28","span":{"begin":39,"end":47},"obj":"JJ"},{"id":"T29","span":{"begin":48,"end":53},"obj":"NN"},{"id":"T30","span":{"begin":54,"end":61},"obj":"NN"},{"id":"T31","span":{"begin":62,"end":66},"obj":"WDT"},{"id":"T32","span":{"begin":67,"end":76},"obj":"VBZ"},{"id":"T33","span":{"begin":77,"end":86},"obj":"NN"},{"id":"T34","span":{"begin":88,"end":92},"obj":"DT"},{"id":"T35","span":{"begin":93,"end":101},"obj":"NN"},{"id":"T36","span":{"begin":102,"end":104},"obj":"IN"},{"id":"T37","span":{"begin":105,"end":108},"obj":"DT"},{"id":"T38","span":{"begin":109,"end":117},"obj":"JJ"},{"id":"T39","span":{"begin":118,"end":123},"obj":"NN"},{"id":"T40","span":{"begin":124,"end":127},"obj":"VBZ"},{"id":"T41","span":{"begin":128,"end":130},"obj":"CD"},{"id":"T42","span":{"begin":131,"end":144},"obj":"NN"},{"id":"T43","span":{"begin":145,"end":150},"obj":"NNS"},{"id":"T44","span":{"begin":152,"end":155},"obj":"WRB"},{"id":"T45","span":{"begin":156,"end":161},"obj":"DT"},{"id":"T46","span":{"begin":162,"end":167},"obj":"NNS"},{"id":"T47","span":{"begin":168,"end":171},"obj":"VBP"},{"id":"T48","span":{"begin":172,"end":184},"obj":"VBN"},{"id":"T49","span":{"begin":185,"end":188},"obj":"MD"},{"id":"T50","span":{"begin":189,"end":195},"obj":"VB"},{"id":"T51","span":{"begin":196,"end":201},"obj":"WDT"},{"id":"T52","span":{"begin":202,"end":207},"obj":"NNS"},{"id":"T53","span":{"begin":208,"end":211},"obj":"DT"}],"relations":[{"id":"R22","pred":"arg2Of","subj":"T25","obj":"T24"},{"id":"R24","pred":"arg1Of","subj":"T25","obj":"T26"},{"id":"R25","pred":"arg2Of","subj":"T30","obj":"T26"},{"id":"R26","pred":"arg1Of","subj":"T30","obj":"T27"},{"id":"R27","pred":"arg1Of","subj":"T30","obj":"T28"},{"id":"R28","pred":"arg1Of","subj":"T30","obj":"T29"},{"id":"R29","pred":"arg1Of","subj":"T30","obj":"T31"},{"id":"R19","pred":"arg2Of","subj":"T22","obj":"T21"},{"id":"R20","pred":"arg3Of","subj":"T23","obj":"T21"},{"id":"R30","pred":"arg1Of","subj":"T30","obj":"T32"},{"id":"R31","pred":"arg2Of","subj":"T33","obj":"T32"},{"id":"R32","pred":"arg1Of","subj":"T35","obj":"T34"},{"id":"R33","pred":"arg1Of","subj":"T35","obj":"T36"},{"id":"R34","pred":"arg2Of","subj":"T39","obj":"T36"},{"id":"R35","pred":"arg1Of","subj":"T39","obj":"T37"},{"id":"R36","pred":"arg1Of","subj":"T39","obj":"T38"},{"id":"R37","pred":"arg1Of","subj":"T35","obj":"T40"},{"id":"R38","pred":"arg2Of","subj":"T43","obj":"T40"},{"id":"R39","pred":"arg1Of","subj":"T43","obj":"T41"},{"id":"R40","pred":"arg1Of","subj":"T43","obj":"T42"},{"id":"R41","pred":"arg1Of","subj":"T48","obj":"T44"},{"id":"R42","pred":"arg1Of","subj":"T46","obj":"T45"},{"id":"R43","pred":"arg1Of","subj":"T46","obj":"T47"},{"id":"R44","pred":"arg2Of","subj":"T48","obj":"T47"},{"id":"R45","pred":"arg2Of","subj":"T46","obj":"T48"},{"id":"R46","pred":"arg1Of","subj":"T44","obj":"T49"},{"id":"R47","pred":"arg2Of","subj":"T50","obj":"T49"},{"id":"R48","pred":"arg1Of","subj":"T44","obj":"T50"},{"id":"R49","pred":"arg2Of","subj":"T51","obj":"T50"},{"id":"R50","pred":"arg1Of","subj":"T52","obj":"T51"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T2","span":{"begin":54,"end":61},"obj":"Body_part"},{"id":"T3","span":{"begin":202,"end":207},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T2","span":{"begin":54,"end":61},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T4","span":{"begin":9,"end":19},"obj":"Species"}],"attributes":[{"id":"A4","pred":"ncbi_taxonomy_id","subj":"T4","obj":"NCBItxid:2697049"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T4","span":{"begin":88,"end":151},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-PD-MONDO
{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T4","span":{"begin":9,"end":19},"obj":"Disease"},{"id":"T5","span":{"begin":77,"end":86},"obj":"Disease"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"17","span":{"begin":48,"end":53},"obj":"Gene"},{"id":"20","span":{"begin":9,"end":19},"obj":"Species"},{"id":"21","span":{"begin":118,"end":123},"obj":"Gene"},{"id":"25","span":{"begin":77,"end":86},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"pubann:denotes","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"pubann:denotes","subj":"20","obj":"Tax:2697049"},{"id":"A21","pred":"pubann:denotes","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"pubann:denotes","subj":"25","obj":"MESH:D007239"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-UniProt
{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2","span":{"begin":48,"end":61},"obj":"Protein"}],"attributes":[{"id":"A2","pred":"uniprot_id","subj":"T2","obj":"https://www.uniprot.org/uniprot/P31340"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-PD-GO-BP-0
{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T1","span":{"begin":131,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sample-GO-BP
{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T1","span":{"begin":131,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":131,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T4","span":{"begin":88,"end":151},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"17","span":{"begin":48,"end":53},"obj":"Gene"},{"id":"20","span":{"begin":9,"end":19},"obj":"Species"},{"id":"21","span":{"begin":118,"end":123},"obj":"Gene"},{"id":"25","span":{"begin":77,"end":86},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"tao:has_database_id","subj":"20","obj":"Tax:2697049"},{"id":"A21","pred":"tao:has_database_id","subj":"21","obj":"Gene:43740568"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"virus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protomer in the trimeric spike has 22 glycosylation sites. How these sites are glycosylated may affect which cells the vi"}