PMC:7199903 / 154-255 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":"navirus 2 (SARS-CoV-2) is focused on the trimeric spike protein that initiates infection. Each protom","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":56,"end":63},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T5","span":{"begin":11,"end":19},"obj":"Disease"},{"id":"T6","span":{"begin":79,"end":88},"obj":"Disease"}],"attributes":[{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1","span":{"begin":23,"end":33},"obj":"http://purl.obolibrary.org/obo/CLO_0009985"}],"attributes":[{"subj":"T1","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":56,"end":63},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T2","span":{"begin":79,"end":88},"obj":"http://purl.obolibrary.org/obo/IDO_0000586"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T20","span":{"begin":8,"end":9},"obj":"CD"},{"id":"T21","span":{"begin":10,"end":11},"obj":"-LRB-"},{"id":"T22","span":{"begin":11,"end":21},"obj":"NN"},{"id":"T23","span":{"begin":21,"end":22},"obj":"-RRB-"},{"id":"T24","span":{"begin":23,"end":25},"obj":"VBZ"},{"id":"T25","span":{"begin":26,"end":33},"obj":"VBN"},{"id":"T26","span":{"begin":34,"end":36},"obj":"IN"},{"id":"T27","span":{"begin":37,"end":40},"obj":"DT"},{"id":"T28","span":{"begin":41,"end":49},"obj":"JJ"},{"id":"T29","span":{"begin":50,"end":55},"obj":"NN"},{"id":"T30","span":{"begin":56,"end":63},"obj":"NN"},{"id":"T31","span":{"begin":64,"end":68},"obj":"WDT"},{"id":"T32","span":{"begin":69,"end":78},"obj":"VBZ"},{"id":"T33","span":{"begin":79,"end":88},"obj":"NN"},{"id":"T34","span":{"begin":90,"end":94},"obj":"DT"}],"relations":[{"id":"R22","pred":"arg2Of","subj":"T25","obj":"T24"},{"id":"R24","pred":"arg1Of","subj":"T25","obj":"T26"},{"id":"R25","pred":"arg2Of","subj":"T30","obj":"T26"},{"id":"R26","pred":"arg1Of","subj":"T30","obj":"T27"},{"id":"R27","pred":"arg1Of","subj":"T30","obj":"T28"},{"id":"R28","pred":"arg1Of","subj":"T30","obj":"T29"},{"id":"R29","pred":"arg1Of","subj":"T30","obj":"T31"},{"id":"R19","pred":"arg2Of","subj":"T22","obj":"T21"},{"id":"R20","pred":"arg3Of","subj":"T23","obj":"T21"},{"id":"R30","pred":"arg1Of","subj":"T30","obj":"T32"},{"id":"R31","pred":"arg2Of","subj":"T33","obj":"T32"}],"attributes":[{"subj":"T20","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T21","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T22","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T23","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T24","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T25","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T26","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T27","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T28","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T29","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T30","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T31","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T32","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T33","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T34","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T2","span":{"begin":56,"end":63},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T2","span":{"begin":56,"end":63},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T4","span":{"begin":11,"end":21},"obj":"Species"}],"attributes":[{"id":"A4","pred":"ncbi_taxonomy_id","subj":"T4","obj":"NCBItxid:2697049"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T4","span":{"begin":11,"end":21},"obj":"Disease"},{"id":"T5","span":{"begin":79,"end":88},"obj":"Disease"}],"attributes":[{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T4","pred":"source","obj":"LitCovid-sample-PD-MONDO"},{"subj":"T5","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"17","span":{"begin":50,"end":55},"obj":"Gene"},{"id":"20","span":{"begin":11,"end":21},"obj":"Species"},{"id":"25","span":{"begin":79,"end":88},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"pubann:denotes","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"pubann:denotes","subj":"20","obj":"Tax:2697049"},{"id":"A25","pred":"pubann:denotes","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"20","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"25","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2","span":{"begin":50,"end":63},"obj":"Protein"}],"attributes":[{"id":"A2","pred":"uniprot_id","subj":"T2","obj":"https://www.uniprot.org/uniprot/P31340"},{"subj":"T2","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"17","span":{"begin":50,"end":55},"obj":"Gene"},{"id":"20","span":{"begin":11,"end":21},"obj":"Species"},{"id":"25","span":{"begin":79,"end":88},"obj":"Disease"}],"attributes":[{"id":"A17","pred":"tao:has_database_id","subj":"17","obj":"Gene:43740568"},{"id":"A20","pred":"tao:has_database_id","subj":"20","obj":"Tax:2697049"},{"id":"A25","pred":"tao:has_database_id","subj":"25","obj":"MESH:D007239"},{"subj":"17","pred":"source","obj":"LitCovid-PubTator"},{"subj":"20","pred":"source","obj":"LitCovid-PubTator"},{"subj":"25","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93b1ec","default":true},{"id":"LitCovid-PD-MONDO","color":"#cbec93"},{"id":"LitCovid-PD-CLO","color":"#ec93e5"},{"id":"LitCovid-PD-CHEBI","color":"#93ecd9"},{"id":"LitCovid-sample-PD-IDO","color":"#ecbf93"},{"id":"LitCovid-sample-Enju","color":"#a593ec"},{"id":"LitCovid-sample-PD-FMA","color":"#9bec93"},{"id":"LitCovid-sample-CHEBI","color":"#ec93b5"},{"id":"LitCovid-sample-PD-NCBITaxon","color":"#93cfec"},{"id":"LitCovid-sample-PD-MONDO","color":"#e9ec93"},{"id":"LitCovid-sample-Pubtator","color":"#d593ec"},{"id":"LitCovid-sample-UniProt","color":"#93ecbb"},{"id":"LitCovid-PubTator","color":"#eca193"}]}]}}