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PMC:7199903 / 15279-15454
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T81 | 4-17 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
T82 | 64-69 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T83 | 159-165 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T84 | 169-174 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T4 | 159-165 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 59-69 | http://purl.obolibrary.org/obo/CLO_0054159 | denotes | 293F cells |
T90 | 114-119 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T91 | 159-165 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T92 | 159-165 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T93 | 159-165 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T94 | 169-174 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T152 | 4-17 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
T153 | 166-168 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T67 | 64-69 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cells |
T68 | 114-119 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T69 | 169-174 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cells |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T46576 | 0-3 | DT | denotes | All |
T7521 | 4-17 | NNS | denotes | glycoproteins |
T49353 | 18-22 | VBD | denotes | were |
T79250 | 23-32 | VBN | denotes | expressed |
T39461 | 33-35 | IN | denotes | as |
T6442 | 36-43 | JJ | denotes | soluble |
T51716 | 44-51 | NNS | denotes | trimers |
T96313 | 52-54 | IN | denotes | in |
T76075 | 55-58 | NN | denotes | HEK |
T83301 | 59-63 | NN | denotes | 293F |
T61867 | 64-69 | NNS | denotes | cells |
T91642 | 70-75 | RB | denotes | apart |
T87881 | 76-80 | IN | denotes | from |
T78049 | 81-85 | NN | denotes | LASV |
T7141 | 86-89 | NN | denotes | GPC |
T10679 | 89-90 | -COMMA- | denotes | , |
T35984 | 91-96 | WDT | denotes | which |
T80005 | 97-100 | VBD | denotes | was |
T17581 | 101-108 | VBN | denotes | derived |
T67465 | 109-113 | IN | denotes | from |
T10445 | 114-124 | JJ | denotes | virus-like |
T56154 | 125-134 | NNS | denotes | particles |
T16557 | 135-139 | IN | denotes | from |
T21578 | 140-151 | JJ | denotes | Madin-Darby |
T80613 | 152-158 | JJ | denotes | canine |
T39899 | 159-165 | NN | denotes | kidney |
T98529 | 166-168 | CD | denotes | II |
T92146 | 169-174 | NNS | denotes | cells |
R7903 | T51716 | T39461 | arg2Of | trimers,as |
R21278 | T51716 | T6442 | arg1Of | trimers,soluble |
R19609 | T51716 | T96313 | arg1Of | trimers,in |
R79690 | T61867 | T96313 | arg2Of | cells,in |
R12669 | T61867 | T76075 | arg1Of | cells,HEK |
R98845 | T61867 | T83301 | arg1Of | cells,293F |
R82558 | T87881 | T91642 | arg1Of | from,apart |
R94995 | T79250 | T87881 | arg1Of | expressed,from |
R66598 | T7141 | T87881 | arg2Of | GPC,from |
R42036 | T7141 | T78049 | arg1Of | GPC,LASV |
R16316 | T7141 | T10679 | arg1Of | GPC,"," |
R37379 | T7141 | T35984 | arg1Of | GPC,which |
R19640 | T7141 | T80005 | arg1Of | GPC,was |
R44949 | T7521 | T46576 | arg1Of | glycoproteins,All |
R86689 | T7521 | T49353 | arg1Of | glycoproteins,were |
R23683 | T79250 | T49353 | arg2Of | expressed,were |
R71973 | T7521 | T79250 | arg2Of | glycoproteins,expressed |
R19814 | T79250 | T39461 | arg1Of | expressed,as |
R51360 | T17581 | T80005 | arg2Of | derived,was |
R67493 | T7141 | T17581 | arg2Of | GPC,derived |
R24293 | T17581 | T67465 | arg1Of | derived,from |
R94686 | T56154 | T67465 | arg2Of | particles,from |
R47738 | T56154 | T10445 | arg1Of | particles,virus-like |
R16827 | T56154 | T16557 | arg1Of | particles,from |
R61880 | T92146 | T16557 | arg2Of | cells,from |
R18138 | T92146 | T21578 | arg1Of | cells,Madin-Darby |
R79336 | T92146 | T80613 | arg1Of | cells,canine |
R77697 | T92146 | T39899 | arg1Of | cells,kidney |
R1683 | T92146 | T98529 | arg1Of | cells,II |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T80 | 4-17 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
T81 | 64-69 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T82 | 159-165 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T83 | 169-174 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T116 | 4-17 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T66 | 81-85 | Species | denotes | LASV | NCBItxid:11620 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T100 | 0-175 | Sentence | denotes | All glycoproteins were expressed as soluble trimers in HEK 293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells. |
LitCovid-sample-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T4 | 159-165 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
525 | 86-89 | Gene | denotes | GPC | Gene:2995 |
532 | 81-85 | Species | denotes | LASV | Tax:11620 |
535 | 55-63 | CellLine | denotes | HEK 293F | CVCL:6642 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T2361 | 4-17 | Protein | denotes | glycoproteins | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
T2446 | 55-58 | Protein | denotes | HEK | https://www.uniprot.org/uniprot/Q9H2V4|https://www.uniprot.org/uniprot/Q9H2V3|https://www.uniprot.org/uniprot/P29320 |
T2449 | 86-89 | Protein | denotes | GPC | https://www.uniprot.org/uniprot/P03711 |
LitCovid-sample-PD-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 159-165 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
LitCovid-sample-Glycan
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T83 | 0-3 | https://glytoucan.org/Structures/Glycans/G05518TD | denotes | All |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T100 | 0-175 | Sentence | denotes | All glycoproteins were expressed as soluble trimers in HEK 293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
525 | 86-89 | Gene | denotes | GPC | Gene:2995 |
532 | 81-85 | Species | denotes | LASV | Tax:11620 |
535 | 55-63 | CellLine | denotes | HEK 293F | CVCL:6642 |