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PMC:7199903 / 15279-15454 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T81 4-17 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T82 64-69 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T83 159-165 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T84 169-174 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 159-165 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T89 59-69 http://purl.obolibrary.org/obo/CLO_0054159 denotes 293F cells
T90 114-119 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T91 159-165 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T92 159-165 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T93 159-165 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T94 169-174 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T152 4-17 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T153 166-168 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T67 64-69 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T68 114-119 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T69 169-174 http://purl.obolibrary.org/obo/CL_0000000 denotes cells

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T46576 0-3 DT denotes All
T7521 4-17 NNS denotes glycoproteins
T49353 18-22 VBD denotes were
T79250 23-32 VBN denotes expressed
T39461 33-35 IN denotes as
T6442 36-43 JJ denotes soluble
T51716 44-51 NNS denotes trimers
T96313 52-54 IN denotes in
T76075 55-58 NN denotes HEK
T83301 59-63 NN denotes 293F
T61867 64-69 NNS denotes cells
T91642 70-75 RB denotes apart
T87881 76-80 IN denotes from
T78049 81-85 NN denotes LASV
T7141 86-89 NN denotes GPC
T10679 89-90 -COMMA- denotes ,
T35984 91-96 WDT denotes which
T80005 97-100 VBD denotes was
T17581 101-108 VBN denotes derived
T67465 109-113 IN denotes from
T10445 114-124 JJ denotes virus-like
T56154 125-134 NNS denotes particles
T16557 135-139 IN denotes from
T21578 140-151 JJ denotes Madin-Darby
T80613 152-158 JJ denotes canine
T39899 159-165 NN denotes kidney
T98529 166-168 CD denotes II
T92146 169-174 NNS denotes cells
R7903 T51716 T39461 arg2Of trimers,as
R21278 T51716 T6442 arg1Of trimers,soluble
R19609 T51716 T96313 arg1Of trimers,in
R79690 T61867 T96313 arg2Of cells,in
R12669 T61867 T76075 arg1Of cells,HEK
R98845 T61867 T83301 arg1Of cells,293F
R82558 T87881 T91642 arg1Of from,apart
R94995 T79250 T87881 arg1Of expressed,from
R66598 T7141 T87881 arg2Of GPC,from
R42036 T7141 T78049 arg1Of GPC,LASV
R16316 T7141 T10679 arg1Of GPC,","
R37379 T7141 T35984 arg1Of GPC,which
R19640 T7141 T80005 arg1Of GPC,was
R44949 T7521 T46576 arg1Of glycoproteins,All
R86689 T7521 T49353 arg1Of glycoproteins,were
R23683 T79250 T49353 arg2Of expressed,were
R71973 T7521 T79250 arg2Of glycoproteins,expressed
R19814 T79250 T39461 arg1Of expressed,as
R51360 T17581 T80005 arg2Of derived,was
R67493 T7141 T17581 arg2Of GPC,derived
R24293 T17581 T67465 arg1Of derived,from
R94686 T56154 T67465 arg2Of particles,from
R47738 T56154 T10445 arg1Of particles,virus-like
R16827 T56154 T16557 arg1Of particles,from
R61880 T92146 T16557 arg2Of cells,from
R18138 T92146 T21578 arg1Of cells,Madin-Darby
R79336 T92146 T80613 arg1Of cells,canine
R77697 T92146 T39899 arg1Of cells,kidney
R1683 T92146 T98529 arg1Of cells,II

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T80 4-17 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T81 64-69 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T82 159-165 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T83 169-174 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T116 4-17 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T66 81-85 Species denotes LASV NCBItxid:11620

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T100 0-175 Sentence denotes All glycoproteins were expressed as soluble trimers in HEK 293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells.

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 159-165 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
525 86-89 Gene denotes GPC Gene:2995
532 81-85 Species denotes LASV Tax:11620
535 55-63 CellLine denotes HEK 293F CVCL:6642

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2361 4-17 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T2446 55-58 Protein denotes HEK https://www.uniprot.org/uniprot/Q9H2V4|https://www.uniprot.org/uniprot/Q9H2V3|https://www.uniprot.org/uniprot/P29320
T2449 86-89 Protein denotes GPC https://www.uniprot.org/uniprot/P03711

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T5 159-165 http://purl.obolibrary.org/obo/MAT_0000119 denotes kidney

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T83 0-3 https://glytoucan.org/Structures/Glycans/G05518TD denotes All

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T100 0-175 Sentence denotes All glycoproteins were expressed as soluble trimers in HEK 293F cells apart from LASV GPC, which was derived from virus-like particles from Madin-Darby canine kidney II cells.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
525 86-89 Gene denotes GPC Gene:2995
532 81-85 Species denotes LASV Tax:11620
535 55-63 CellLine denotes HEK 293F CVCL:6642