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PMC:7199903 / 14351-14565 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T6 14-21 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T78 14-21 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T79 205-213 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T50 178-186 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 192-200 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T86 67-69 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T87 127-135 http://purl.obolibrary.org/obo/CLO_0009898 denotes (10), no
T88 152-155 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T149 14-21 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T150 205-213 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T66450 0-7 IN denotes Whereas
T54192 8-13 JJ denotes small
T75704 14-26 JJ denotes mannose-type
T64679 27-35 NNS denotes clusters
T67961 36-40 VBP denotes have
T50872 41-45 VBN denotes been
T72397 46-59 VBN denotes characterized
T86083 60-62 IN denotes on
T19628 63-66 DT denotes the
T60379 67-69 NN denotes S1
T95927 70-77 NN denotes subunit
T61088 78-80 IN denotes of
T88650 81-87 NNP denotes Middle
T77913 88-92 NNP denotes East
T59650 93-104 JJ denotes respiratory
T56889 105-113 NN denotes syndrome
T75209 114-115 -LRB- denotes (
T65502 115-119 NNS denotes MERS
T47025 119-120 -RRB- denotes )
T38619 120-124 NN denotes –CoV
T85027 125-126 NN denotes S
T41284 127-128 -LRB- denotes (
T20092 128-130 CD denotes 10
T67731 130-131 -RRB- denotes )
T60447 131-132 -COMMA- denotes ,
T26837 133-135 DT denotes no
T36825 136-140 JJ denotes such
T21633 141-151 NN denotes phenomenon
T72717 152-155 VBZ denotes has
T43289 156-160 VBN denotes been
T51132 161-169 VBN denotes observed
T85295 170-173 IN denotes for
T9791 174-177 DT denotes the
T26717 178-188 NN denotes SARS-CoV-1
T27044 189-191 CC denotes or
T2105 192-202 NN denotes SARS-CoV-2
T82926 203-204 NN denotes S
T59746 205-213 NNS denotes proteins
R75808 T64679 T72397 arg2Of clusters,characterized
R34980 T72397 T86083 arg1Of characterized,on
R12505 T85027 T86083 arg2Of S,on
R31920 T95927 T19628 arg1Of subunit,the
R17894 T95927 T60379 arg1Of subunit,S1
R83295 T85027 T95927 arg1Of S,subunit
R93169 T95927 T61088 arg1Of subunit,of
R49323 T51132 T66450 arg1Of observed,Whereas
R56483 T72397 T66450 arg2Of characterized,Whereas
R28990 T64679 T54192 arg1Of clusters,small
R60142 T64679 T75704 arg1Of clusters,mannose-type
R43003 T64679 T67961 arg1Of clusters,have
R97960 T72397 T67961 arg2Of characterized,have
R5307 T64679 T50872 arg1Of clusters,been
R78469 T72397 T50872 arg2Of characterized,been
R57246 T56889 T61088 arg2Of syndrome,of
R69324 T77913 T88650 arg1Of East,Middle
R44960 T56889 T77913 arg1Of syndrome,East
R81536 T56889 T59650 arg1Of syndrome,respiratory
R20253 T56889 T75209 arg1Of syndrome,(
R22259 T65502 T75209 arg2Of MERS,(
R7632 T47025 T75209 arg3Of ),(
R94528 T85027 T38619 arg1Of S,–CoV
R62994 T85027 T41284 arg1Of S,(
R74989 T20092 T41284 arg2Of 10,(
R55359 T67731 T41284 arg3Of ),(
R41904 T51132 T60447 arg1Of observed,","
R56659 T21633 T26837 arg1Of phenomenon,no
R62328 T21633 T36825 arg1Of phenomenon,such
R85946 T21633 T72717 arg1Of phenomenon,has
R30106 T51132 T72717 arg2Of observed,has
R52908 T21633 T43289 arg1Of phenomenon,been
R69651 T51132 T43289 arg2Of observed,been
R93533 T21633 T51132 arg2Of phenomenon,observed
R12880 T51132 T85295 arg1Of observed,for
R70010 T59746 T85295 arg2Of proteins,for
R26917 T59746 T9791 arg1Of proteins,the
R29046 T59746 T26717 arg1Of proteins,SARS-CoV-1
R56504 T26717 T27044 arg1Of SARS-CoV-1,or
R84605 T2105 T27044 arg2Of SARS-CoV-2,or
R66137 T59746 T2105 arg1Of proteins,SARS-CoV-2
R81470 T59746 T82926 arg1Of proteins,S

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T77 14-21 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801
T78 205-213 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T114 14-21 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T115 205-213 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T57 115-119 Species denotes MERS NCBItxid:1335626
T58 178-186 Species denotes SARS-CoV NCBItxid:694009
T59 192-202 Species denotes SARS-CoV-2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T94 0-214 Sentence denotes Whereas small mannose-type clusters have been characterized on the S1 subunit of Middle East respiratory syndrome (MERS)–CoV S (10), no such phenomenon has been observed for the SARS-CoV-1 or SARS-CoV-2 S proteins.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T44 178-186 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T45 192-202 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
492 203-204 Gene denotes S Gene:43740568
494 115-124 Species denotes MERS)–CoV Tax:1335626
495 178-186 Species denotes SARS-CoV Tax:694009
496 192-202 Species denotes SARS-CoV-2 Tax:2697049
502 14-21 Chemical denotes mannose MESH:D008358
507 81-113 Disease denotes Middle East respiratory syndrome MESH:D018352

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2326 203-213 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T82 14-21 http://rdf.glyconavi.org/CarTNa/CarTNa218/trivialname denotes mannose

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T94 0-214 Sentence denotes Whereas small mannose-type clusters have been characterized on the S1 subunit of Middle East respiratory syndrome (MERS)–CoV S (10), no such phenomenon has been observed for the SARS-CoV-1 or SARS-CoV-2 S proteins.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
492 203-204 Gene denotes S Gene:43740568
494 115-124 Species denotes MERS)–CoV Tax:1335626
495 178-186 Species denotes SARS-CoV Tax:694009
496 192-202 Species denotes SARS-CoV-2 Tax:2697049
502 14-21 Chemical denotes mannose MESH:D008358
507 81-113 Disease denotes Middle East respiratory syndrome MESH:D018352