PMC:7199903 / 12887-13027
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T66 | 62-70 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T67 | 74-77 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T76 | 136-138 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T128 | 62-70 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T129 | 123-130 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28276 | 0-3 | IN | denotes | For |
T16362 | 4-11 | NN | denotes | example |
T16646 | 11-12 | -COMMA- | denotes | , |
T86047 | 13-16 | CD | denotes | one |
T49490 | 17-19 | IN | denotes | of |
T73507 | 20-23 | DT | denotes | the |
T59944 | 24-28 | RBS | denotes | most |
T25572 | 29-36 | RB | denotes | densely |
T28586 | 37-49 | VBN | denotes | glycosylated |
T97814 | 50-55 | JJ | denotes | viral |
T45720 | 56-61 | NN | denotes | spike |
T63316 | 62-70 | NNS | denotes | proteins |
T67493 | 71-73 | VBZ | denotes | is |
T5107 | 74-79 | NN | denotes | HIV-1 |
T33765 | 80-83 | NN | denotes | Env |
T65352 | 83-84 | -COMMA- | denotes | , |
T93662 | 85-90 | WDT | denotes | which |
T82020 | 91-99 | VBZ | denotes | exhibits |
T54543 | 100-103 | CD | denotes | ~60 |
T27723 | 103-104 | NN | denotes | % |
T66901 | 105-122 | JJ | denotes | oligomannose-type |
T75833 | 123-130 | NNS | denotes | glycans |
T67860 | 131-132 | -LRB- | denotes | ( |
T96850 | 132-134 | CD | denotes | 21 |
T16706 | 134-135 | -COMMA- | denotes | , |
T77788 | 136-138 | CD | denotes | 34 |
T37032 | 138-139 | -RRB- | denotes | ) |
R64838 | T67493 | T28276 | arg1Of | is,For |
R66091 | T16362 | T28276 | arg2Of | example,For |
R52990 | T67493 | T16646 | arg1Of | is,"," |
R79975 | T86047 | T49490 | arg1Of | one,of |
R17404 | T63316 | T49490 | arg2Of | proteins,of |
R43321 | T63316 | T73507 | arg1Of | proteins,the |
R88890 | T25572 | T59944 | arg1Of | densely,most |
R11827 | T28586 | T25572 | arg1Of | glycosylated,densely |
R17573 | T63316 | T28586 | arg1Of | proteins,glycosylated |
R17686 | T63316 | T97814 | arg1Of | proteins,viral |
R66791 | T63316 | T45720 | arg1Of | proteins,spike |
R58603 | T86047 | T67493 | arg1Of | one,is |
R25150 | T33765 | T67493 | arg2Of | Env,is |
R34663 | T33765 | T5107 | arg1Of | Env,HIV-1 |
R52209 | T33765 | T65352 | arg1Of | Env,"," |
R33489 | T33765 | T93662 | arg1Of | Env,which |
R86704 | T33765 | T82020 | arg1Of | Env,exhibits |
R7415 | T75833 | T82020 | arg2Of | glycans,exhibits |
R41910 | T75833 | T54543 | arg1Of | glycans,~60 |
R72236 | T54543 | T27723 | arg1Of | ~60,% |
R69478 | T75833 | T66901 | arg1Of | glycans,oligomannose-type |
R80841 | T75833 | T67860 | arg1Of | glycans,( |
R32128 | T96850 | T67860 | arg2Of | 21,( |
R2357 | T37032 | T67860 | arg3Of | ),( |
R64521 | T96850 | T16706 | arg1Of | 21,"," |
R19069 | T77788 | T16706 | arg2Of | 34,"," |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T65 | 62-70 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T66 | 74-77 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T97 | 62-70 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T98 | 123-130 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T49 | 74-79 | Species | denotes | HIV-1 | NCBItxid:11676 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T86 | 0-140 | Sentence | denotes | For example, one of the most densely glycosylated viral spike proteins is HIV-1 Env, which exhibits ~60% oligomannose-type glycans (21, 34). |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
424 | 56-61 | Gene | denotes | spike | Gene:43740568 |
425 | 80-83 | Gene | denotes | Env | Gene:100616444 |
429 | 74-79 | Species | denotes | HIV-1 | Tax:11676 |
435 | 105-117 | Chemical | denotes | oligomannose | |
436 | 123-130 | Chemical | denotes | glycans | MESH:D011134 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T2201 | 56-70 | Protein | denotes | spike proteins | https://www.uniprot.org/uniprot/P31340 |
T2202 | 80-83 | Protein | denotes | Env | https://www.uniprot.org/uniprot/C1JJY3 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T86 | 0-140 | Sentence | denotes | For example, one of the most densely glycosylated viral spike proteins is HIV-1 Env, which exhibits ~60% oligomannose-type glycans (21, 34). |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
424 | 56-61 | Gene | denotes | spike | Gene:43740568 |
425 | 80-83 | Gene | denotes | Env | Gene:100616444 |
429 | 74-79 | Species | denotes | HIV-1 | Tax:11676 |
435 | 105-117 | Chemical | denotes | oligomannose | |
436 | 123-130 | Chemical | denotes | glycans | MESH:D011134 |