PMC:7199903 / 12043-12360 JSONTXT

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    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T62","span":{"begin":67,"end":70},"obj":"Body_part"},{"id":"T63","span":{"begin":232,"end":239},"obj":"Body_part"}],"attributes":[{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A63","pred":"fma_id","subj":"T63","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T47","span":{"begin":157,"end":165},"obj":"Disease"}],"attributes":[{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T120","span":{"begin":102,"end":109},"obj":"Chemical"},{"id":"T121","span":{"begin":232,"end":239},"obj":"Chemical"}],"attributes":[{"id":"A120","pred":"chebi_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A121","pred":"chebi_id","subj":"T121","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T63829","span":{"begin":4,"end":5},"obj":"-SEMICOLON-"},{"id":"T81382","span":{"begin":6,"end":9},"obj":"IN"},{"id":"T81639","span":{"begin":10,"end":17},"obj":"NN"},{"id":"T68824","span":{"begin":17,"end":18},"obj":"-COMMA-"},{"id":"T74600","span":{"begin":19,"end":22},"obj":"DT"},{"id":"T75459","span":{"begin":23,"end":28},"obj":"JJ"},{"id":"T89951","span":{"begin":29,"end":35},"obj":"NN"},{"id":"T85605","span":{"begin":36,"end":44},"obj":"NNS"},{"id":"T15079","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T84691","span":{"begin":48,"end":55},"obj":"JJ"},{"id":"T80203","span":{"begin":56,"end":63},"obj":"NNS"},{"id":"T42509","span":{"begin":64,"end":66},"obj":"IN"},{"id":"T9223","span":{"begin":67,"end":72},"obj":"NN"},{"id":"T85904","span":{"begin":73,"end":76},"obj":"NNP"},{"id":"T39591","span":{"begin":77,"end":83},"obj":"VBP"},{"id":"T34970","span":{"begin":84,"end":101},"obj":"JJ"},{"id":"T30840","span":{"begin":102,"end":109},"obj":"NNS"},{"id":"T45153","span":{"begin":110,"end":114},"obj":"WDT"},{"id":"T63554","span":{"begin":115,"end":118},"obj":"VBP"},{"id":"T4647","span":{"begin":119,"end":129},"obj":"VBN"},{"id":"T39962","span":{"begin":130,"end":132},"obj":"IN"},{"id":"T85483","span":{"begin":133,"end":143},"obj":"NNS"},{"id":"T24812","span":{"begin":144,"end":145},"obj":"-LRB-"},{"id":"T57703","span":{"begin":145,"end":147},"obj":"CD"},{"id":"T38925","span":{"begin":147,"end":148},"obj":"-COMMA-"},{"id":"T19195","span":{"begin":149,"end":151},"obj":"CD"},{"id":"T95768","span":{"begin":151,"end":152},"obj":"-RRB-"},{"id":"T55772","span":{"begin":154,"end":156},"obj":"IN"},{"id":"T93860","span":{"begin":157,"end":167},"obj":"NNP"},{"id":"T11027","span":{"begin":168,"end":169},"obj":"NNP"},{"id":"T74449","span":{"begin":169,"end":170},"obj":"-COMMA-"},{"id":"T90837","span":{"begin":171,"end":174},"obj":"DT"},{"id":"T15204","span":{"begin":175,"end":192},"obj":"JJ"},{"id":"T55177","span":{"begin":193,"end":203},"obj":"NNS"},{"id":"T53039","span":{"begin":204,"end":207},"obj":"VBP"},{"id":"T53002","span":{"begin":208,"end":214},"obj":"RB"},{"id":"T87754","span":{"begin":215,"end":224},"obj":"VBN"},{"id":"T50880","span":{"begin":225,"end":227},"obj":"IN"},{"id":"T93426","span":{"begin":228,"end":231},"obj":"DT"},{"id":"T45604","span":{"begin":232,"end":239},"obj":"NN"},{"id":"T87038","span":{"begin":240,"end":249},"obj":"NN"},{"id":"T10097","span":{"begin":249,"end":250},"obj":"-COMMA-"},{"id":"T50034","span":{"begin":251,"end":253},"obj":"IN"},{"id":"T49931","span":{"begin":254,"end":265},"obj":"VBN"},{"id":"T94522","span":{"begin":266,"end":268},"obj":"IN"},{"id":"T43296","span":{"begin":269,"end":272},"obj":"DT"},{"id":"T9232","span":{"begin":273,"end":277},"obj":"NN"},{"id":"T92160","span":{"begin":278,"end":284},"obj":"NN"},{"id":"T26033","span":{"begin":284,"end":285},"obj":"-COMMA-"},{"id":"T24753","span":{"begin":286,"end":291},"obj":"WDT"},{"id":"T5394","span":{"begin":292,"end":294},"obj":"VBZ"},{"id":"T50345","span":{"begin":295,"end":304},"obj":"RB"},{"id":"T12006","span":{"begin":305,"end":315},"obj":"VBN"}],"relations":[{"id":"R30337","pred":"arg2Of","subj":"T39591","obj":"T63829"},{"id":"R86701","pred":"arg1Of","subj":"T39591","obj":"T81382"},{"id":"R58257","pred":"arg2Of","subj":"T81639","obj":"T81382"},{"id":"R33161","pred":"arg1Of","subj":"T39591","obj":"T68824"},{"id":"R42194","pred":"arg1Of","subj":"T85605","obj":"T74600"},{"id":"R24907","pred":"arg1Of","subj":"T85605","obj":"T75459"},{"id":"R75429","pred":"arg1Of","subj":"T85605","obj":"T89951"},{"id":"R23628","pred":"arg1Of","subj":"T85605","obj":"T15079"},{"id":"R65174","pred":"arg2Of","subj":"T80203","obj":"T15079"},{"id":"R87354","pred":"arg1Of","subj":"T80203","obj":"T84691"},{"id":"R47236","pred":"arg1Of","subj":"T80203","obj":"T42509"},{"id":"R66332","pred":"arg2Of","subj":"T85904","obj":"T42509"},{"id":"R87770","pred":"arg1Of","subj":"T85904","obj":"T9223"},{"id":"R70404","pred":"arg1Of","subj":"T85605","obj":"T39591"},{"id":"R80782","pred":"arg2Of","subj":"T30840","obj":"T39591"},{"id":"R15402","pred":"arg1Of","subj":"T30840","obj":"T34970"},{"id":"R73524","pred":"arg1Of","subj":"T30840","obj":"T45153"},{"id":"R82531","pred":"arg1Of","subj":"T30840","obj":"T63554"},{"id":"R24632","pred":"arg2Of","subj":"T4647","obj":"T63554"},{"id":"R63517","pred":"arg1Of","subj":"T85483","obj":"T4647"},{"id":"R27739","pred":"arg2Of","subj":"T30840","obj":"T4647"},{"id":"R50305","pred":"arg2Of","subj":"T85483","obj":"T39962"},{"id":"R48498","pred":"arg1Of","subj":"T85483","obj":"T24812"},{"id":"R65330","pred":"arg2Of","subj":"T57703","obj":"T24812"},{"id":"R81174","pred":"arg3Of","subj":"T95768","obj":"T24812"},{"id":"R62699","pred":"arg1Of","subj":"T57703","obj":"T38925"},{"id":"R59274","pred":"arg2Of","subj":"T19195","obj":"T38925"},{"id":"R12731","pred":"arg1Of","subj":"T87754","obj":"T55772"},{"id":"R54495","pred":"arg2Of","subj":"T11027","obj":"T55772"},{"id":"R13500","pred"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for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T61","span":{"begin":67,"end":70},"obj":"Body_part"},{"id":"T62","span":{"begin":232,"end":239},"obj":"Body_part"}],"attributes":[{"id":"A61","pred":"fma_id","subj":"T61","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A62","pred":"fma_id","subj":"T62","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T91","span":{"begin":102,"end":109},"obj":"Chemical"},{"id":"T92","span":{"begin":232,"end":239},"obj":"Chemical"}],"attributes":[{"id":"A91","pred":"chebi_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A92","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T47","span":{"begin":67,"end":72},"obj":"Species"},{"id":"T48","span":{"begin":157,"end":167},"obj":"Species"}],"attributes":[{"id":"A47","pred":"ncbi_taxonomy_id","subj":"T47","obj":"NCBItxid:11676"},{"id":"A48","pred":"ncbi_taxonomy_id","subj":"T48","obj":"NCBItxid:2697049"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T41","span":{"begin":157,"end":167},"obj":"Disease"}],"attributes":[{"id":"A41","pred":"mondo_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"395","span":{"begin":73,"end":76},"obj":"Gene"},{"id":"396","span":{"begin":168,"end":169},"obj":"Gene"},{"id":"397","span":{"begin":67,"end":72},"obj":"Species"},{"id":"398","span":{"begin":157,"end":167},"obj":"Species"},{"id":"401","span":{"begin":29,"end":35},"obj":"Chemical"},{"id":"402","span":{"begin":84,"end":96},"obj":"Chemical"},{"id":"403","span":{"begin":102,"end":109},"obj":"Chemical"},{"id":"404","span":{"begin":175,"end":187},"obj":"Chemical"},{"id":"405","span":{"begin":278,"end":284},"obj":"Chemical"}],"attributes":[{"id":"A397","pred":"pubann:denotes","subj":"397","obj":"Tax:11676"},{"id":"A395","pred":"pubann:denotes","subj":"395","obj":"Gene:100616444"},{"id":"A403","pred":"pubann:denotes","subj":"403","obj":"MESH:D011134"},{"id":"A396","pred":"pubann:denotes","subj":"396","obj":"Gene:43740568"},{"id":"A405","pred":"pubann:denotes","subj":"405","obj":"MESH:D011134"},{"id":"A398","pred":"pubann:denotes","subj":"398","obj":"Tax:2697049"},{"id":"A401","pred":"pubann:denotes","subj":"401","obj":"MESH:D011134"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T2030","span":{"begin":73,"end":76},"obj":"Protein"}],"attributes":[{"id":"A2030","pred":"uniprot_id","subj":"T2030","obj":"https://www.uniprot.org/uniprot/C1JJY3"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"395","span":{"begin":73,"end":76},"obj":"Gene"},{"id":"396","span":{"begin":168,"end":169},"obj":"Gene"},{"id":"397","span":{"begin":67,"end":72},"obj":"Species"},{"id":"398","span":{"begin":157,"end":167},"obj":"Species"},{"id":"401","span":{"begin":29,"end":35},"obj":"Chemical"},{"id":"402","span":{"begin":84,"end":96},"obj":"Chemical"},{"id":"403","span":{"begin":102,"end":109},"obj":"Chemical"},{"id":"404","span":{"begin":175,"end":187},"obj":"Chemical"},{"id":"405","span":{"begin":278,"end":284},"obj":"Chemical"}],"attributes":[{"id":"A395","pred":"tao:has_database_id","subj":"395","obj":"Gene:100616444"},{"id":"A396","pred":"tao:has_database_id","subj":"396","obj":"Gene:43740568"},{"id":"A397","pred":"tao:has_database_id","subj":"397","obj":"Tax:11676"},{"id":"A398","pred":"tao:has_database_id","subj":"398","obj":"Tax:2697049"},{"id":"A401","pred":"tao:has_database_id","subj":"401","obj":"MESH:D011134"},{"id":"A403","pred":"tao:has_database_id","subj":"403","obj":"MESH:D011134"},{"id":"A405","pred":"tao:has_database_id","subj":"405","obj":"MESH:D011134"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"eins; for example, the dense glycan clusters in several strains of HIV-1 Env induce oligomannose-type glycans that are recognized by antibodies (32, 33). In SARS-CoV-2 S, the oligomannose-type structures are likely protected by the protein component, as exemplified by the N234 glycan, which is partially sandwiched b"}