PMC:7199903 / 10077-10164 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7199903","sourcedb":"PMC","sourceid":"7199903","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7199903","text":" site occupancy.\nUsing the cryo-EM structure of the trimeric SARS-CoV-2 S protein [Prot","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T55","span":{"begin":74,"end":81},"obj":"Body_part"}],"attributes":[{"id":"A55","pred":"fma_id","subj":"T55","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T55","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T40","span":{"begin":61,"end":69},"obj":"Disease"}],"attributes":[{"id":"A40","pred":"mondo_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T40","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T101","span":{"begin":32,"end":34},"obj":"Chemical"},{"id":"T102","span":{"begin":74,"end":81},"obj":"Chemical"}],"attributes":[{"id":"A101","pred":"chebi_id","subj":"T101","obj":"http://purl.obolibrary.org/obo/CHEBI_73507"},{"id":"A102","pred":"chebi_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T101","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T102","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T52","span":{"begin":1,"end":5},"obj":"http://purl.obolibrary.org/obo/BFO_0000029"}],"attributes":[{"subj":"T52","pred":"source","obj":"LitCovid-sample-PD-IDO"}]},{"project":"LitCovid-sample-Enju","denotations":[{"id":"T24696","span":{"begin":1,"end":5},"obj":"NN"},{"id":"T22130","span":{"begin":6,"end":15},"obj":"NN"},{"id":"T30763","span":{"begin":17,"end":22},"obj":"VBG"},{"id":"T13476","span":{"begin":23,"end":26},"obj":"DT"},{"id":"T42306","span":{"begin":27,"end":34},"obj":"NN"},{"id":"T91220","span":{"begin":35,"end":44},"obj":"NN"},{"id":"T69994","span":{"begin":45,"end":47},"obj":"IN"},{"id":"T71591","span":{"begin":48,"end":51},"obj":"DT"},{"id":"T48558","span":{"begin":52,"end":60},"obj":"JJ"},{"id":"T23500","span":{"begin":61,"end":71},"obj":"NN"},{"id":"T25885","span":{"begin":72,"end":73},"obj":"NN"},{"id":"T17500","span":{"begin":74,"end":81},"obj":"NN"},{"id":"T82169","span":{"begin":82,"end":83},"obj":"-LRB-"}],"relations":[{"id":"R2326","pred":"arg1Of","subj":"T22130","obj":"T24696"},{"id":"R58330","pred":"arg2Of","subj":"T91220","obj":"T30763"},{"id":"R92587","pred":"arg1Of","subj":"T91220","obj":"T13476"},{"id":"R60849","pred":"arg1Of","subj":"T91220","obj":"T42306"},{"id":"R27705","pred":"arg1Of","subj":"T91220","obj":"T69994"},{"id":"R62000","pred":"arg2Of","subj":"T17500","obj":"T69994"},{"id":"R76411","pred":"arg1Of","subj":"T17500","obj":"T71591"},{"id":"R45653","pred":"arg1Of","subj":"T17500","obj":"T48558"},{"id":"R35651","pred":"arg1Of","subj":"T17500","obj":"T23500"},{"id":"R21026","pred":"arg1Of","subj":"T17500","obj":"T25885"},{"id":"R68974","pred":"arg1Of","subj":"T91220","obj":"T82169"}],"attributes":[{"subj":"T24696","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T22130","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T30763","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T13476","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T42306","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T91220","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T69994","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T71591","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T48558","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T23500","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T25885","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T17500","pred":"source","obj":"LitCovid-sample-Enju"},{"subj":"T82169","pred":"source","obj":"LitCovid-sample-Enju"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T54","span":{"begin":74,"end":81},"obj":"Body_part"}],"attributes":[{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T54","pred":"source","obj":"LitCovid-sample-PD-FMA"}]},{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T78","span":{"begin":74,"end":81},"obj":"Chemical"}],"attributes":[{"id":"A78","pred":"chebi_id","subj":"T78","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"subj":"T78","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T39","span":{"begin":61,"end":71},"obj":"Species"}],"attributes":[{"id":"A39","pred":"ncbi_taxonomy_id","subj":"T39","obj":"NCBItxid:2697049"},{"subj":"T39","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T34","span":{"begin":61,"end":71},"obj":"Disease"}],"attributes":[{"id":"A34","pred":"mondo_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T34","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"337","span":{"begin":72,"end":81},"obj":"Gene"},{"id":"338","span":{"begin":61,"end":71},"obj":"Species"}],"attributes":[{"id":"A337","pred":"pubann:denotes","subj":"337","obj":"Gene:43740568"},{"id":"A338","pred":"pubann:denotes","subj":"338","obj":"Tax:2697049"},{"subj":"337","pred":"source","obj":"LitCovid-sample-Pubtator"},{"subj":"338","pred":"source","obj":"LitCovid-sample-Pubtator"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T1201","span":{"begin":72,"end":81},"obj":"Protein"}],"attributes":[{"id":"A1201","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A1202","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A1203","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A1204","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A1205","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A1206","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A1207","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A1208","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A1209","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A1210","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A1211","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A1212","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A1213","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A1214","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A1215","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A1216","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A1217","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A1218","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A1219","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A1220","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A1221","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A1222","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A1223","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A1224","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A1225","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A1226","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A1227","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A1228","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A1229","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A1230","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A1231","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A1232","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A1233","pred":"uniprot_id","subj":"T1201","obj":"https://www.uniprot.org/uniprot/A5A6L9"},{"subj":"T1201","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"337","span":{"begin":72,"end":81},"obj":"Gene"},{"id":"338","span":{"begin":61,"end":71},"obj":"Species"}],"attributes":[{"id":"A337","pred":"tao:has_database_id","subj":"337","obj":"Gene:43740568"},{"id":"A338","pred":"tao:has_database_id","subj":"338","obj":"Tax:2697049"},{"subj":"337","pred":"source","obj":"LitCovid-PubTator"},{"subj":"338","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#ec93a7","default":true},{"id":"LitCovid-PD-MONDO","color":"#93c1ec"},{"id":"LitCovid-PD-CHEBI","color":"#dbec93"},{"id":"LitCovid-sample-PD-IDO","color":"#e293ec"},{"id":"LitCovid-sample-Enju","color":"#93ecc8"},{"id":"LitCovid-sample-PD-FMA","color":"#ecae93"},{"id":"LitCovid-sample-CHEBI","color":"#9493ec"},{"id":"LitCovid-sample-PD-NCBITaxon","color":"#abec93"},{"id":"LitCovid-sample-PD-MONDO","color":"#ec93c5"},{"id":"LitCovid-sample-Pubtator","color":"#93dfec"},{"id":"LitCovid-sample-UniProt","color":"#ecdf93"},{"id":"LitCovid-PubTator","color":"#c593ec"}]}]}}