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PMC:7195088 / 53097-54053 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1561 144-152 Species denotes patients Tax:9606
1562 378-386 Species denotes patients Tax:9606
1563 613-621 Species denotes patients Tax:9606
1564 10-20 Disease denotes infections MESH:D007239
1565 53-61 Disease denotes COVID-19 MESH:C000657245
1566 186-201 Disease denotes viral pneumonia
1567 253-264 Disease denotes coinfection MESH:D060085
1568 354-374 Disease denotes bacterial infections MESH:D001424
1569 392-400 Disease denotes COVID-19 MESH:C000657245
1570 467-477 Disease denotes infections MESH:D007239
1571 604-612 Disease denotes COVID-19 MESH:C000657245
1572 800-811 Disease denotes coinfection MESH:D060085
1573 861-869 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T87 192-201 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T279 0-20 Disease denotes Bacterial infections http://purl.obolibrary.org/obo/MONDO_0005113
T280 53-61 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T281 186-201 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T282 192-201 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T283 354-377 Disease denotes bacterial infections in http://purl.obolibrary.org/obo/MONDO_0005113
T284 392-400 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T285 457-477 Disease denotes bacterial infections http://purl.obolibrary.org/obo/MONDO_0005113
T286 604-612 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T287 861-869 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T304 504-512 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T28167 693-704 Chemical denotes antibiotics http://purl.obolibrary.org/obo/CHEBI_33281

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T401 0-202 Sentence denotes Bacterial infections can present simultaneously with COVID-19 or occur later during the course of the disease, worsening clinical conditions of patients who were recovering from primary viral pneumonia.
T402 203-303 Sentence denotes Information regarding the prevalence of bacterial coinfection or superinfection is scant [28,44,45].
T403 304-438 Sentence denotes According to the available reports, prevalence of bacterial infections in patients with COVID-19 ranges between 1% and 10% [28,44,46].
T404 439-571 Sentence denotes In these reports, bacterial infections were due to Gram-negative bacteria including Enterobacterales and nonfermenting rods [28,44].
T405 572-870 Sentence denotes It is of note that up to 98% of COVID-19 patients in available experiences received intravenous broad-spectrum empirical antibiotics [28,44,45,47], probably reflecting the frequent inability to exclude the presence of bacterial coinfection at the onset of severe clinical presentations of COVID-19.
T406 871-956 Sentence denotes This could have possibly lowered the overall prevalence of bacterial superinfections.

2_test

Id Subject Object Predicate Lexical cue
32360444-32007143-22369775 293-295 32007143 denotes 28
32360444-31986264-22369776 296-298 31986264 denotes 44
32360444-32109013-22369777 299-301 32109013 denotes 45
32360444-32007143-22369778 428-430 32007143 denotes 28
32360444-31986264-22369779 431-433 31986264 denotes 44
32360444-32007143-22369780 564-566 32007143 denotes 28
32360444-31986264-22369781 567-569 31986264 denotes 44
32360444-32007143-22369782 706-708 32007143 denotes 28
32360444-31986264-22369783 709-711 31986264 denotes 44
32360444-32109013-22369784 712-714 32109013 denotes 45