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PMC:7189872 / 17674-18318 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
334 442-447 Gene denotes HLA-A Gene:3105
335 560-568 Gene denotes HLA-DRB1 Gene:3123
336 602-610 Gene denotes HLA-DRB1 Gene:3123
337 520-525 Gene denotes HLA-A Gene:3105
338 481-486 Gene denotes HLA-A Gene:3105
339 328-331 Gene denotes HLA Gene:3123
341 282-285 Gene denotes HLA Gene:3123
344 94-97 Gene denotes MHC Gene:3107
345 84-87 Gene denotes MHC Gene:3107

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T175 84-87 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T176 94-97 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T177 282-285 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T178 328-331 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T179 340-350 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T180 442-445 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T181 481-484 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T182 520-523 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T183 560-563 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T184 602-605 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T139 203-204 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T140 446-447 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T141 485-489 http://purl.obolibrary.org/obo/CLO_0001553 denotes A*11
T142 524-525 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T156 98-100 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T157 340-350 Chemical denotes Amino acid http://purl.obolibrary.org/obo/CHEBI_33704
T158 346-350 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T17 157-172 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T159 0-234 Sentence denotes MHCPred results (Table 7 ) indicate quantitative estimation of IC50 values for both MHC I and MHC II alleles for respective Epitopes shows elicitation of an immune response when this data is deployed in a population coverage analysis.
T160 235-327 Sentence denotes Table 7 MHCPred results depict IC50 Values for HLA Alleles and confidence of the prediction.
T161 328-441 Sentence denotes HLA Alleles Amino acid groups Predicted -logIC50 (M) Predicted IC50 Value (nM) Confidence of prediction (Max = 1)
T162 442-480 Sentence denotes HLA-A*68:01 FTIGTVTLK 7.116 76.56 1.00
T163 481-519 Sentence denotes HLA-A*11:01 ITLCFTLKR 7.028 93.76 1.00
T164 520-559 Sentence denotes HLA-A*68:01 ITLCFTLKR 6.282 522.40 0.78
T165 560-601 Sentence denotes HLA-DRB1*01:01 VYQLRARSV 7.624 23.77 0.89
T166 602-644 Sentence denotes HLA-DRB1*07:01 VYQLRARSV 6.734 184.50 0.89

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T352 84-89 GO:0042613 denotes MHC I
T353 94-100 GO:0042613 denotes MHC II
T354 101-108 SO:0001023 denotes alleles
T355 124-132 BV_9 denotes Epitopes
T356 157-163 UBERON:0002405;GO:0006955 denotes immune
T357 164-172 GO:0006955 denotes response
T362 286-293 SO:0001023 denotes Alleles