PMC:7189872 / 14270-14596 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"270","span":{"begin":6,"end":15},"obj":"Chemical"},{"id":"271","span":{"begin":82,"end":90},"obj":"Chemical"},{"id":"272","span":{"begin":188,"end":201},"obj":"Chemical"},{"id":"273","span":{"begin":206,"end":212},"obj":"Chemical"}],"attributes":[{"id":"A270","pred":"tao:has_database_id","subj":"270","obj":"MESH:D013912"},{"id":"A271","pred":"tao:has_database_id","subj":"271","obj":"MESH:D006859"},{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"MESH:D018698"},{"id":"A273","pred":"tao:has_database_id","subj":"273","obj":"MESH:D008239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T142","span":{"begin":6,"end":15},"obj":"Body_part"},{"id":"T143","span":{"begin":188,"end":201},"obj":"Body_part"},{"id":"T144","span":{"begin":206,"end":212},"obj":"Body_part"},{"id":"T145","span":{"begin":277,"end":288},"obj":"Body_part"}],"attributes":[{"id":"A142","pred":"fma_id","subj":"T142","obj":"http://purl.org/sig/ont/fma/fma82765"},{"id":"A143","pred":"fma_id","subj":"T143","obj":"http://purl.org/sig/ont/fma/fma82762"},{"id":"A144","pred":"fma_id","subj":"T144","obj":"http://purl.org/sig/ont/fma/fma82758"},{"id":"A145","pred":"fma_id","subj":"T145","obj":"http://purl.org/sig/ont/fma/fma82739"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T106","span":{"begin":80,"end":81},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T107","span":{"begin":250,"end":251},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T97","span":{"begin":52,"end":59},"obj":"Chemical"},{"id":"T98","span":{"begin":82,"end":90},"obj":"Chemical"},{"id":"T99","span":{"begin":159,"end":164},"obj":"Chemical"},{"id":"T100","span":{"begin":188,"end":201},"obj":"Chemical"},{"id":"T101","span":{"begin":197,"end":201},"obj":"Chemical"},{"id":"T102","span":{"begin":206,"end":212},"obj":"Chemical"},{"id":"T104","span":{"begin":252,"end":256},"obj":"Chemical"},{"id":"T106","span":{"begin":277,"end":288},"obj":"Chemical"},{"id":"T107","span":{"begin":277,"end":282},"obj":"Chemical"},{"id":"T108","span":{"begin":283,"end":288},"obj":"Chemical"}],"attributes":[{"id":"A97","pred":"chebi_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/CHEBI_53000"},{"id":"A98","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A99","pred":"chebi_id","subj":"T99","obj":"http://purl.obolibrary.org/obo/CHEBI_33250"},{"id":"A100","pred":"chebi_id","subj":"T100","obj":"http://purl.obolibrary.org/obo/CHEBI_18237"},{"id":"A101","pred":"chebi_id","subj":"T101","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A102","pred":"chebi_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/CHEBI_18019"},{"id":"A103","pred":"chebi_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/CHEBI_25094"},{"id":"A104","pred":"chebi_id","subj":"T104","obj":"http://purl.obolibrary.org/obo/CHEBI_24866"},{"id":"A105","pred":"chebi_id","subj":"T104","obj":"http://purl.obolibrary.org/obo/CHEBI_26710"},{"id":"A106","pred":"chebi_id","subj":"T106","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A107","pred":"chebi_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A108","pred":"chebi_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}

{"project":"LitCovid-sentences","denotations":[{"id":"T129","span":{"begin":0,"end":326},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T262","span":{"begin":52,"end":59},"obj":"BV_9"},{"id":"T263","span":{"begin":159,"end":164},"obj":"CHEBI:33250;CHEBI:33250"},{"id":"T264","span":{"begin":229,"end":240},"obj":"CHEBI:50325;CHEBI:50325"},{"id":"T265","span":{"begin":252,"end":256},"obj":"CHEBI:24866;CHEBI:24866"}],"text":"Here, Threonine at 2nd,5th, and 7th position in the epitope generate preferably a hydrogen bond due to the presence of partially charged positive and negative atoms, and also 4th position Glutamic acid and lysine at 8th position side chains can form a salt bridge, while other amino acids result in van der Waals interactions."}