> top > docs > PMC:7189872 > spans > 12500-13726 > annotations

PMC:7189872 / 12500-13726 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
214 764-767 Gene denotes ACE Gene:1636
215 788-793 Gene denotes HLA-A Gene:3105
216 837-842 Gene denotes HLA-A Gene:3105
217 886-891 Gene denotes HLA-A Gene:3105
218 934-939 Gene denotes HLA-A Gene:3105
219 983-988 Gene denotes HLA-A Gene:3105
220 1032-1037 Gene denotes HLA-A Gene:3105
221 711-714 Gene denotes HLA Gene:3123
223 604-607 Gene denotes Ace Gene:1636
242 185-188 Gene denotes ACE Gene:1636
243 247-253 Gene denotes ORF-7A Gene:43740573
244 299-304 Gene denotes HLA-A Gene:3105
245 312-317 Gene denotes HLA-A Gene:3105
246 368-374 Gene denotes ORF-3a Gene:43740569
247 465-471 Gene denotes ORF-7a Gene:43740573
248 518-526 Gene denotes HLA-DRB1 Gene:3123
249 534-542 Gene denotes HLA-DRB1 Gene:3123
250 411-416 Gene denotes HLA-A Gene:3105
251 505-508 Gene denotes HLA Gene:3123
252 399-402 Gene denotes HLA Gene:3123
253 286-289 Gene denotes HLA Gene:3123
254 140-143 Gene denotes HLA Gene:3123
255 557-560 Gene denotes MHC Gene:3107
256 427-430 Gene denotes MHC Gene:3107
257 328-331 Gene denotes MHC Gene:3107
258 64-67 Gene denotes MHC Gene:3107
259 76-79 Gene denotes HLA Gene:3123

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T110 64-67 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T111 76-79 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T112 127-130 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T113 140-143 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T114 254-261 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T115 286-289 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T116 299-302 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T117 312-315 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T118 328-331 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T119 375-382 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T120 399-402 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T121 411-414 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T122 427-430 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T123 472-479 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T124 505-508 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T125 518-521 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T126 534-537 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T127 557-560 Body_part denotes MHC http://purl.org/sig/ont/fma/fma84079
T128 711-714 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T129 788-791 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T130 837-840 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T131 886-889 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T132 934-937 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T133 983-986 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795
T134 1032-1035 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T92 157-158 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T93 303-307 http://purl.obolibrary.org/obo/CLO_0001553 denotes A*11
T94 316-317 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T95 415-416 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T96 792-793 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T97 841-842 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T98 890-894 http://purl.obolibrary.org/obo/CLO_0001553 denotes A*11
T99 938-942 http://purl.obolibrary.org/obo/CLO_0001553 denotes A*11
T100 987-988 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T101 1036-1037 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T88 103-110 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T89 137-139 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T90 254-261 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T91 375-382 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T92 472-479 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T93 567-569 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T111 0-217 Sentence denotes It was found that FTIGTVTLK, ITLCFTLKR epitopes interacted with MHC class I HLA Alleles, and VYQLRARSV epitope interacted with MHC Class II HLA alleles with a perfect binding score and ACE values as shown in Table 5 .
T112 218-439 Sentence denotes The ITLCFTLKR Epitope of the ORF-7A protein exhibits binding with 2 HLA alleles (HLA-A*11:01, HLA-A*68:01) of MHC Class I, while FTIGTVTLK Epitope of ORF-3a protein interact with 1 HLA Allele (HLA-A*68:01) of MHC Class I.
T113 440-577 Sentence denotes The VYQLRARSV Epitope of ORF-7a protein interacts clearly with 2 HLA Alleles (HLA-DRB1*01:01, HLA-DRB1*07:01) of the MHC Class II domain.
T114 578-702 Sentence denotes Table 5 Binding Energies, Ace Values for Docked Complexes based on DINC Server and PatchDock Analysis for Putative Epitopes.
T115 703-777 Sentence denotes Epitope HLA Allele Binding score (kcal/mol) Patch dock score ACE Selection
T116 778-826 Sentence denotes FTIGTVTLK HLA-A*68:01 −8.80 8066 178.91 Selected
T117 827-875 Sentence denotes RLWLCWKCR HLA-A*31:01 −4.80 8916 117.53 Rejected
T118 876-923 Sentence denotes GTITVEELK HLA-A*11:01 −3.80 8040 78.78 Rejected
T119 924-972 Sentence denotes ITLCFTLKR HLA-A*11:01 −3.70 8206 −25.88 Selected
T120 973-1021 Sentence denotes ITLCFTLKR HLA-A*68:01 −7.60 8136 184.55 Selected
T121 1022-1071 Sentence denotes VFITLCFTL HLA-A*23:01 −4.40 7706 −134.91 Rejected
T122 1072-1123 Sentence denotes WLLWPVTLA HLADRB1*04:01 −8.60 9432 −150.96 Rejected
T123 1124-1175 Sentence denotes VYQLRARSV HLADRB1*01:01 −6.20 6874 −168.74 Selected
T124 1176-1226 Sentence denotes VYQLRARSV HLADRB1*07:01 −6.20 6842 262.74 Selected

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T220 39-47 BV_9 denotes epitopes
T221 64-75 GO:0042613 denotes MHC class I
T222 80-87 SO:0001023 denotes Alleles
T223 103-110 BV_9 denotes epitope
T224 127-143 GO:0042613 denotes MHC Class II HLA
T225 144-151 SO:0001023 denotes alleles
T226 232-239 BV_9 denotes Epitope
T227 247-250 SO:0000236 denotes ORF
T228 290-297 SO:0001023 denotes alleles
T229 299-304 PR:000002009 denotes HLA-A
T230 312-317 PR:000002009 denotes HLA-A
T231 328-337 GO:0042613 denotes MHC Class
T232 357-364 BV_9 denotes Epitope
T233 368-371 SO:0000236 denotes ORF
T234 403-409 SO:0001023 denotes Allele
T235 411-416 PR:000002009 denotes HLA-A
T236 427-438 GO:0042613 denotes MHC Class I
T237 454-461 BV_9 denotes Epitope
T238 465-468 SO:0000236 denotes ORF
T239 509-516 SO:0001023 denotes Alleles
T240 518-526 PR:000002019 denotes HLA-DRB1
T241 534-542 PR:000002019 denotes HLA-DRB1
T242 557-569 GO:0042613 denotes MHC Class II
T243 570-576 SO:0000417 denotes domain
T247 626-635 GO:0032991 denotes Complexes
T248 693-701 BV_9 denotes Epitopes
T91279 144-151 SO:0001023 denotes alleles