PMC:7170415 / 16481-17305
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 239 | 596-603 | Species | denotes | patient | Tax:9606 |
| 240 | 794-804 | Species | denotes | SARS–CoV-2 | Tax:2697049 |
| 241 | 501-512 | Species | denotes | respiratory | Tax:12814 |
| 242 | 709-720 | Species | denotes | respiratory | Tax:12814 |
| 243 | 276-286 | Species | denotes | SARS–CoV-2 | Tax:2697049 |
| 244 | 183-192 | Disease | denotes | infection | MESH:D007239 |
| 245 | 470-478 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T20 | 300-305 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
| T21 | 310-315 | Body_part | denotes | urine | http://purl.org/sig/ont/fma/fma12274 |
| T22 | 495-518 | Body_part | denotes | upper respiratory tract | http://purl.org/sig/ont/fma/fma45661 |
| T23 | 703-726 | Body_part | denotes | upper respiratory tract | http://purl.org/sig/ont/fma/fma45661 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T8 | 300-305 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T9 | 310-315 | Body_part | denotes | urine | http://purl.obolibrary.org/obo/UBERON_0001088 |
| T10 | 495-518 | Body_part | denotes | upper respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001557 |
| T11 | 501-518 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
| T12 | 703-726 | Body_part | denotes | upper respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001557 |
| T13 | 709-726 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T68 | 183-192 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T69 | 276-280 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T70 | 470-478 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T71 | 794-798 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T156 | 295-297 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T157 | 539-540 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T158 | 594-595 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T159 | 604-607 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T160 | 612-613 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T161 | 623-627 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T17 | 363-375 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T18 | 371-375 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T122 | 300-413 | Sentence | denotes | Serum and urine are usually negative for the presence of viral nucleic acid, regardless of illness severity (33). |
| T123 | 414-575 | Sentence | denotes | Of importance, the ability of RT-PCR assays to rule out COVID-19 on the basis of upper respiratory tract samples obtained at a single time point remains unclear. |
| T124 | 576-824 | Sentence | denotes | Conversely, after a patient has had a positive test result, several authorities have recommended obtaining at least 2 negative upper respiratory tract samples, collected at intervals of 24 hours or longer, to document SARS–CoV-2 clearance (37, 38). |