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PMC:7166305 / 4706-5573 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T21 324-330 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 324-330 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T36 190-205 Disease denotes Type 2 diabetes http://purl.obolibrary.org/obo/MONDO_0005148
T37 197-205 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T38 231-243 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T39 273-295 Disease denotes Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T40 324-339 Disease denotes Kidney diseases http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T42 532-540 Disease denotes Diarrhea http://purl.obolibrary.org/obo/MONDO_0001673

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T35 115-119 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T36 115-119 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T37 120-122 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T38 324-330 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T39 324-330 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T40 324-330 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T41 384-386 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T42 466-468 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T28 613-622 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T29 623-632 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T30 788-794 Chemical denotes Oxygen http://purl.obolibrary.org/obo/CHEBI_15379

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T51 0-7 Sentence denotes No. (%)
T52 8-61 Sentence denotes Total (n = 21) Survival (n = 17) Non-survival (n = 4)
T53 62-114 Sentence denotes Age, mean (s.d.) 62.5 (12.6) 61.5 (9.5) 79.7 (14.3)⁎
T54 115-147 Sentence denotes Male 11 (52.3) 9 (53.9) 2 (50.0)
T55 148-188 Sentence denotes Comorbidities 13 (61.9) 9 (53.9) 4 (100)
T56 189-229 Sentence denotes  Type 2 diabetes 3 (14.3) 3 (17.6) 0 (0)
T57 230-271 Sentence denotes  Hypertension 10 (47.6) 8 (35.3) 2 (50.0)
T58 272-322 Sentence denotes  Cardiovascular disease 5 (23.8) 3 (17.6) 2 (50.0)
T59 323-361 Sentence denotes  Kidney diseases 1 (4.8) 1 (5.8) 0 (0)
T60 362-376 Sentence denotes Onset symptoms
T61 377-411 Sentence denotes  Fever 18 (85.7) 14 (82.3) 4 (100)
T62 412-446 Sentence denotes  Cough 20 (95.2) 16 (94.1) 4 (100)
T63 447-483 Sentence denotes  Fatigue 15 (71.4) 11 (64.7) 4 (100)
T64 484-530 Sentence denotes  Shortness of breath 9 (42.8) 5 (29.4) 4 (100)
T65 531-563 Sentence denotes  Diarrhea 2 (9.5) 2 (11.7) 0 (0)
T66 564-573 Sentence denotes Treatment
T67 574-611 Sentence denotes  Arbidol 15 (71.4) 12 (70.6) 3 (75.0)
T68 612-659 Sentence denotes  Lopinavir/ritonavir 7 (33.3) 4 (23.5) 3 (75.0)
T69 660-709 Sentence denotes  Interferon inhalation 7 (33.3) 4 (23.5) 3 (75.0)
T70 710-749 Sentence denotes  Corticosteroid 3 (14.3) 3 (17.6) 0 (0)
T71 750-786 Sentence denotes  Thymalfasin 6 (28.6) 6 (35.3) 0 (0)
T72 787-820 Sentence denotes  Oxygen 8 (38.1) 4 (23.5) 4 (100)
T73 821-867 Sentence denotes  Mechanical ventilation 4 (19.0) 0 (0) 4 (100)

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T12 190-205 Phenotype denotes Type 2 diabetes http://purl.obolibrary.org/obo/HP_0005978
T13 231-243 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T14 273-295 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T15 324-339 Phenotype denotes Kidney diseases http://purl.obolibrary.org/obo/HP_0000112
T16 378-383 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T17 413-418 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T18 448-455 Phenotype denotes Fatigue http://purl.obolibrary.org/obo/HP_0012378
T19 485-504 Phenotype denotes Shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T20 532-540 Phenotype denotes Diarrhea http://purl.obolibrary.org/obo/HP_0002014

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T55 273-287 UBERON:0004535 denotes Cardiovascular
T56 324-330 UBERON:0002113 denotes Kidney
T57 575-585 DG_49 denotes Arbidol 15
T58 613-622 DG_23 denotes Lopinavir
T59 623-634 DG_30 denotes ritonavir 7
T60 711-727 CHEBI:50858;CHEBI:50858 denotes Corticosteroid 3
T4676 273-287 UBERON:0004535 denotes Cardiovascular
T31009 324-330 UBERON:0002113 denotes Kidney
T31002 575-585 DG_49 denotes Arbidol 15
T45645 613-622 DG_23 denotes Lopinavir
T6788 623-634 DG_30 denotes ritonavir 7
T70091 711-727 CHEBI:50858;CHEBI:50858 denotes Corticosteroid 3

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
100 613-632 Chemical denotes Lopinavir/ritonavir MESH:C558899
101 197-205 Disease denotes diabetes MESH:D003920
102 231-243 Disease denotes Hypertension MESH:D006973
103 273-295 Disease denotes Cardiovascular disease MESH:D002318
104 324-339 Disease denotes Kidney diseases MESH:D007674
105 368-383 Disease denotes symptoms  Fever MESH:D051271
106 413-418 Disease denotes Cough MESH:D003371
107 448-455 Disease denotes Fatigue MESH:D005221
108 485-504 Disease denotes Shortness of breath MESH:D004417
109 532-540 Disease denotes Diarrhea MESH:D003967