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PMC:7164859 / 887-2020 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
25 1025-1035 Species denotes SARS-CoV-2 Tax:2697049
26 1036-1047 Species denotes coronavirus Tax:11118
27 463-468 Chemical denotes water MESH:D014867
28 505-507 Chemical denotes CO MESH:D002248
29 509-512 Chemical denotes CO2 MESH:D002245
30 535-547 Chemical denotes hydrocarbons MESH:D006838
31 549-565 Chemical denotes hydrocyanic acid MESH:D006856
32 567-576 Chemical denotes aldehydes MESH:D000447
33 625-634 Disease denotes cancerous MESH:D009369
34 765-781 Disease denotes pneumoperitoneum MESH:D011027
35 1068-1076 Disease denotes Covid-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 613-618 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T3 669-672 Body_part denotes DNA http://purl.org/sig/ont/fma/fma74412

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 1025-1033 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T5 77-80 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T6 515-522 http://purl.obolibrary.org/obo/OBI_0100026 denotes organic
T7 515-522 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organic
T8 613-618 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T9 637-645 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria
T10 686-689 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T11 696-697 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 463-468 Chemical denotes water http://purl.obolibrary.org/obo/CHEBI_15377
T2 505-507 Chemical denotes CO http://purl.obolibrary.org/obo/CHEBI_17245
T3 509-512 Chemical denotes CO2 http://purl.obolibrary.org/obo/CHEBI_16526
T4 535-547 Chemical denotes hydrocarbons http://purl.obolibrary.org/obo/CHEBI_24632
T5 549-565 Chemical denotes hydrocyanic acid http://purl.obolibrary.org/obo/CHEBI_18407
T6 561-565 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T7 567-576 Chemical denotes aldehydes http://purl.obolibrary.org/obo/CHEBI_17478
T8 669-672 Chemical denotes DNA http://purl.obolibrary.org/obo/CHEBI_16991

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T10 0-12 Sentence denotes Introduction
T11 13-129 Sentence denotes Contamination of healthcare professionals (HCPs) during surgery has been known for many years and is well described.
T12 130-306 Sentence denotes Before the laparoscopy era, the source was essentially surgical fumes produced by heat-producing techniques such as electrosurgery (mono- or bipolar), lasers or ultrasound [1].
T13 307-412 Sentence denotes These peroperative risks have been abundantly addressed in the literature, which we need not detail here.
T14 413-673 Sentence denotes Depending on the case, surgical smoke can contain water vapour (95%), inorganic pollutants (CO, CO2), organic pollutants (hydrocarbons, hydrocyanic acid, aldehydes), and biological pollutants such as cells (some cancerous), bacteria and fragments of viral DNA.
T15 674-791 Sentence denotes Laparoscopy has added a further source of airborne pollution, namely aerosols generated by pneumoperitoneum gas flow.
T16 792-925 Sentence denotes This article specifically concerns the risk of viral contamination during laparoscopy in the setting of the current Covid-9 epidemic.
T17 926-1133 Sentence denotes Our purpose here is to analyse the literature data on the viral contamination risk for HCPs by the SARS-CoV-2 coronavirus responsible for the Covid-19 epidemic and discuss means of protection and prevention.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T10 271-278 CL:0000103 denotes bipolar
T11 463-468 CHEBI:15377;CHEBI:15377 denotes water
T12 493-503 CHEBI:33893;CHEBI:33893 denotes pollutants
T13 505-507 CHEBI:16526;CHEBI:16526 denotes CO
T14 509-512 CHEBI:16526;CHEBI:16526 denotes CO2
T15 515-533 CHEBI:64709;CHEBI:64709 denotes organic pollutants
T16 535-547 CHEBI:24632;CHEBI:24632 denotes hydrocarbons
T17 549-560 CHEBI:33848;CHEBI:33848 denotes hydrocyanic
T18 561-565 CHEBI:37527;CHEBI:37527 denotes acid
T19 567-576 CHEBI:17478;CHEBI:17478 denotes aldehydes
T20 594-604 CHEBI:33893;CHEBI:33893 denotes pollutants
T21 637-645 NCBITaxon:2 denotes bacteria
T22 663-668 NCBITaxon:10239 denotes viral
T23 765-781 UBERON:0001179 denotes pneumoperitoneum
T24 839-844 NCBITaxon:10239 denotes viral
T25 984-989 NCBITaxon:10239 denotes viral
T26 1025-1035 SP_7 denotes SARS-CoV-2
T27 1036-1047 NCBITaxon:11118 denotes coronavirus
T28 1068-1076 SP_7 denotes Covid-19
T80635 271-278 CL:0000103 denotes bipolar
T56108 463-468 CHEBI:15377;CHEBI:15377 denotes water
T2857 493-503 CHEBI:33893;CHEBI:33893 denotes pollutants
T31795 505-507 CHEBI:16526;CHEBI:16526 denotes CO
T58740 509-512 CHEBI:16526;CHEBI:16526 denotes CO2
T31192 515-533 CHEBI:64709;CHEBI:64709 denotes organic pollutants
T82405 535-547 CHEBI:24632;CHEBI:24632 denotes hydrocarbons
T57071 549-560 CHEBI:33848;CHEBI:33848 denotes hydrocyanic
T16376 561-565 CHEBI:37527;CHEBI:37527 denotes acid
T22524 567-576 CHEBI:17478;CHEBI:17478 denotes aldehydes
T70855 594-604 CHEBI:33893;CHEBI:33893 denotes pollutants
T46772 637-645 NCBITaxon:2 denotes bacteria
T53892 663-668 NCBITaxon:10239 denotes viral
T15723 765-781 UBERON:0001179 denotes pneumoperitoneum
T37610 839-844 NCBITaxon:10239 denotes viral
T662 984-989 NCBITaxon:10239 denotes viral
T83801 1025-1035 SP_7 denotes SARS-CoV-2
T30922 1036-1047 NCBITaxon:11118 denotes coronavirus
T83257 1068-1076 SP_7 denotes Covid-19