PMC:7162774 / 3555-3896 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7162774","sourcedb":"PMC","sourceid":"7162774","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7162774","text":"The patient's clinical course was later complicated by septic shock in the setting of Escherichia coli and Lactobacillus species bacteremia, hyperbilirubinemia secondary to acalculous cholecystitis with requirement for percutaneous cholecystostomy, and acute blood loss anemia secondary to gastrointestinal bleed requiring blood transfusion.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"117","span":{"begin":4,"end":11},"obj":"Species"},{"id":"118","span":{"begin":86,"end":102},"obj":"Species"},{"id":"120","span":{"begin":55,"end":67},"obj":"Disease"},{"id":"121","span":{"begin":129,"end":139},"obj":"Disease"},{"id":"122","span":{"begin":141,"end":159},"obj":"Disease"},{"id":"123","span":{"begin":173,"end":197},"obj":"Disease"},{"id":"124","span":{"begin":232,"end":247},"obj":"Disease"},{"id":"125","span":{"begin":253,"end":276},"obj":"Disease"},{"id":"126","span":{"begin":290,"end":312},"obj":"Disease"}],"attributes":[{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"Tax:9606"},{"id":"A118","pred":"tao:has_database_id","subj":"118","obj":"Tax:562"},{"id":"A120","pred":"tao:has_database_id","subj":"120","obj":"MESH:D012772"},{"id":"A121","pred":"tao:has_database_id","subj":"121","obj":"MESH:D016470"},{"id":"A122","pred":"tao:has_database_id","subj":"122","obj":"MESH:D006932"},{"id":"A123","pred":"tao:has_database_id","subj":"123","obj":"MESH:D042101"},{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"MESH:D006473"},{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"MESH:D006471"},{"subj":"117","pred":"source","obj":"LitCovid-PubTator"},{"subj":"118","pred":"source","obj":"LitCovid-PubTator"},{"subj":"120","pred":"source","obj":"LitCovid-PubTator"},{"subj":"121","pred":"source","obj":"LitCovid-PubTator"},{"subj":"122","pred":"source","obj":"LitCovid-PubTator"},{"subj":"123","pred":"source","obj":"LitCovid-PubTator"},{"subj":"124","pred":"source","obj":"LitCovid-PubTator"},{"subj":"125","pred":"source","obj":"LitCovid-PubTator"},{"subj":"126","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T44","span":{"begin":86,"end":102},"obj":"NCBITaxon:562"},{"id":"T45","span":{"begin":107,"end":120},"obj":"NCBITaxon:1578"},{"id":"T46","span":{"begin":121,"end":128},"obj":"NCBITaxon:species"},{"id":"T47","span":{"begin":259,"end":264},"obj":"UBERON:0000178"},{"id":"T48","span":{"begin":290,"end":306},"obj":"UBERON:0005409"},{"id":"T49","span":{"begin":323,"end":328},"obj":"UBERON:0000178"},{"id":"T84632","span":{"begin":86,"end":102},"obj":"NCBITaxon:562"},{"id":"T83692","span":{"begin":107,"end":120},"obj":"NCBITaxon:1578"},{"id":"T69565","span":{"begin":121,"end":128},"obj":"NCBITaxon:species"},{"id":"T75923","span":{"begin":259,"end":264},"obj":"UBERON:0000178"},{"id":"T14243","span":{"begin":290,"end":306},"obj":"UBERON:0005409"},{"id":"T28472","span":{"begin":323,"end":328},"obj":"UBERON:0000178"}],"attributes":[{"subj":"T44","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T45","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T46","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T47","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T48","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T49","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T84632","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T83692","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T69565","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T75923","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T14243","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T28472","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T11","span":{"begin":259,"end":264},"obj":"Body_part"},{"id":"T12","span":{"begin":323,"end":328},"obj":"Body_part"}],"attributes":[{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma9670"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T11","span":{"begin":259,"end":264},"obj":"Body_part"},{"id":"T12","span":{"begin":323,"end":328},"obj":"Body_part"}],"attributes":[{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T28","span":{"begin":129,"end":139},"obj":"Disease"},{"id":"T29","span":{"begin":141,"end":159},"obj":"Disease"},{"id":"T31","span":{"begin":173,"end":197},"obj":"Disease"},{"id":"T33","span":{"begin":270,"end":276},"obj":"Disease"}],"attributes":[{"id":"A28","pred":"mondo_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/MONDO_0005229"},{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0002408"},{"id":"A30","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0024288"},{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0002155"},{"id":"A32","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0006633"},{"id":"A33","pred":"mondo_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/MONDO_0002280"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T45","span":{"begin":259,"end":264},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T46","span":{"begin":259,"end":264},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T47","span":{"begin":323,"end":328},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T48","span":{"begin":323,"end":328},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"}],"attributes":[{"subj":"T45","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T46","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T47","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T25","span":{"begin":0,"end":341},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T25","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T26","span":{"begin":62,"end":67},"obj":"Phenotype"},{"id":"T27","span":{"begin":129,"end":139},"obj":"Phenotype"},{"id":"T28","span":{"begin":141,"end":159},"obj":"Phenotype"},{"id":"T29","span":{"begin":184,"end":197},"obj":"Phenotype"},{"id":"T30","span":{"begin":270,"end":276},"obj":"Phenotype"},{"id":"T31","span":{"begin":290,"end":312},"obj":"Phenotype"}],"attributes":[{"id":"A26","pred":"hp_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/HP_0031273"},{"id":"A27","pred":"hp_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/HP_0031864"},{"id":"A28","pred":"hp_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/HP_0002904"},{"id":"A29","pred":"hp_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/HP_0001082"},{"id":"A30","pred":"hp_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/HP_0001903"},{"id":"A31","pred":"hp_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/HP_0002239"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-HP"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#bf93ec","default":true},{"id":"LitCovid-PMC-OGER-BB","color":"#93eca5"},{"id":"LitCovid-PD-FMA-UBERON","color":"#ec939a"},{"id":"LitCovid-PD-UBERON","color":"#93b4ec"},{"id":"LitCovid-PD-MONDO","color":"#ceec93"},{"id":"LitCovid-PD-CLO","color":"#ec93e8"},{"id":"LitCovid-sentences","color":"#93ecd5"},{"id":"LitCovid-PD-HP","color":"#ecbb93"}]}]}}