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PMC:7160614 / 7486-8615 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
153 194-196 Disease denotes HD MESH:D006816
157 926-944 Gene denotes C-reactive protein Gene:1401
158 952-955 Gene denotes CRP Gene:1401
159 586-594 Species denotes patients Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 39-44 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T5 663-667 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T6 681-686 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T7 697-702 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T8 795-811 Body_part denotes white blood cell http://purl.org/sig/ont/fma/fma62852
T9 807-811 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T10 826-836 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T11 854-864 Body_part denotes lymphocyte http://purl.org/sig/ont/fma/fma62863
T12 866-876 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T13 893-903 Body_part denotes neutrophil http://purl.org/sig/ont/fma/fma62860
T14 937-944 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T15 962-973 Body_part denotes erythrocyte http://purl.org/sig/ont/fma/fma62845

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 39-44 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T4 681-686 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T5 697-702 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T6 801-806 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T45 194-196 Disease denotes HD http://purl.obolibrary.org/obo/MONDO_0007739
T46 920-923 Disease denotes PCT http://purl.obolibrary.org/obo/MONDO_0008296|http://purl.obolibrary.org/obo/MONDO_0015104

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T38 39-44 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T39 388-389 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 496-498 http://purl.obolibrary.org/obo/CLO_0002857 denotes E1
T41 681-686 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T42 681-686 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T43 697-702 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T44 697-702 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T45 697-702 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T46 697-702 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T47 801-806 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T48 807-811 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T49 962-973 http://purl.obolibrary.org/obo/CL_0000232 denotes erythrocyte

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T7 174-176 Chemical denotes GE http://purl.obolibrary.org/obo/CHEBI_73801
T8 194-196 Chemical denotes HD http://purl.obolibrary.org/obo/CHEBI_73925
T9 937-944 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T60 0-34 Sentence denotes Image and clinical data collection
T61 35-335 Sentence denotes The chest CT imaging data without contrast material enhancement were obtained from multiple hospitals with different CT systems, including GE CT Discovery 750 HD (General Electric Company), SCENARIA 64 CT (Hitachi Medical), Philips Ingenuity CT (PHILIPS), and Siemens SOMATOM Definition AS (Siemens).
T62 336-410 Sentence denotes All images were reconstructed into 1-mm slices with a slice gap of 0.8 mm.
T63 411-500 Sentence denotes Detailed acquisition parameters were summarized in the Supplementary Material (Table E1).
T64 501-595 Sentence denotes The clinical history, nursing records, and laboratory findings were reviewed for all patients.
T65 596-788 Sentence denotes Clinical characteristics, including demographic information, daily body temperature, blood pressure, heart rate, clinical symptoms, and history of exposure to epidemic centers, were collected.
T66 789-1013 Sentence denotes Total white blood cell (WBC) counts, lymphocyte counts, ratio of lymphocyte, neutrophil count, ratio of neutrophil, procalcitonin (PCT), C-reactive protein level (CRP), and erythrocyte sedimentation rate (ESR) were measured.
T67 1014-1129 Sentence denotes All threshold values chosen for laboratory metrics were based on the normal ranges set by each individual hospital.