PMC:7160614 / 20971-21904 JSONTXT

Annnotations TAB JSON ListView MergeView

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"300","span":{"begin":539,"end":544},"obj":"Disease"},{"id":"301","span":{"begin":555,"end":562},"obj":"Disease"},{"id":"302","span":{"begin":866,"end":871},"obj":"Disease"},{"id":"303","span":{"begin":882,"end":889},"obj":"Disease"}],"attributes":[{"id":"A300","pred":"tao:has_database_id","subj":"300","obj":"MESH:D003371"},{"id":"A301","pred":"tao:has_database_id","subj":"301","obj":"MESH:D005221"},{"id":"A302","pred":"tao:has_database_id","subj":"302","obj":"MESH:D003371"},{"id":"A303","pred":"tao:has_database_id","subj":"303","obj":"MESH:D005221"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T48","span":{"begin":463,"end":468},"obj":"Body_part"},{"id":"T49","span":{"begin":506,"end":522},"obj":"Body_part"},{"id":"T50","span":{"begin":518,"end":522},"obj":"Body_part"},{"id":"T51","span":{"begin":571,"end":581},"obj":"Body_part"},{"id":"T52","span":{"begin":789,"end":794},"obj":"Body_part"},{"id":"T53","span":{"begin":833,"end":849},"obj":"Body_part"},{"id":"T54","span":{"begin":845,"end":849},"obj":"Body_part"},{"id":"T55","span":{"begin":900,"end":910},"obj":"Body_part"}],"attributes":[{"id":"A48","pred":"fma_id","subj":"T48","obj":"http://purl.org/sig/ont/fma/fma7088"},{"id":"A49","pred":"fma_id","subj":"T49","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A50","pred":"fma_id","subj":"T50","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A51","pred":"fma_id","subj":"T51","obj":"http://purl.org/sig/ont/fma/fma62863"},{"id":"A52","pred":"fma_id","subj":"T52","obj":"http://purl.org/sig/ont/fma/fma7088"},{"id":"A53","pred":"fma_id","subj":"T53","obj":"http://purl.org/sig/ont/fma/fma62852"},{"id":"A54","pred":"fma_id","subj":"T54","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A55","pred":"fma_id","subj":"T55","obj":"http://purl.org/sig/ont/fma/fma62863"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-PD-UBERON

    {"project":"LitCovid-PD-UBERON","denotations":[{"id":"T34","span":{"begin":368,"end":374},"obj":"Body_part"},{"id":"T35","span":{"begin":463,"end":468},"obj":"Body_part"},{"id":"T36","span":{"begin":512,"end":517},"obj":"Body_part"},{"id":"T37","span":{"begin":728,"end":734},"obj":"Body_part"},{"id":"T38","span":{"begin":789,"end":794},"obj":"Body_part"},{"id":"T39","span":{"begin":839,"end":844},"obj":"Body_part"}],"attributes":[{"id":"A34","pred":"uberon_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A35","pred":"uberon_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"A36","pred":"uberon_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A37","pred":"uberon_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A38","pred":"uberon_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"A39","pred":"uberon_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T130","span":{"begin":53,"end":55},"obj":"http://purl.obolibrary.org/obo/CLO_0053794"},{"id":"T131","span":{"begin":368,"end":374},"obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"T132","span":{"begin":463,"end":468},"obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"T133","span":{"begin":463,"end":468},"obj":"http://purl.obolibrary.org/obo/UBERON_0007100"},{"id":"T134","span":{"begin":463,"end":468},"obj":"http://purl.obolibrary.org/obo/UBERON_0015228"},{"id":"T135","span":{"begin":463,"end":468},"obj":"http://www.ebi.ac.uk/efo/EFO_0000815"},{"id":"T136","span":{"begin":512,"end":517},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T137","span":{"begin":518,"end":522},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T138","span":{"begin":728,"end":734},"obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"T139","span":{"begin":789,"end":794},"obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"T140","span":{"begin":789,"end":794},"obj":"http://purl.obolibrary.org/obo/UBERON_0007100"},{"id":"T141","span":{"begin":789,"end":794},"obj":"http://purl.obolibrary.org/obo/UBERON_0015228"},{"id":"T142","span":{"begin":789,"end":794},"obj":"http://www.ebi.ac.uk/efo/EFO_0000815"},{"id":"T143","span":{"begin":839,"end":844},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T144","span":{"begin":845,"end":849},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T7","span":{"begin":441,"end":452},"obj":"http://purl.obolibrary.org/obo/GO_0045333"},{"id":"T8","span":{"begin":441,"end":452},"obj":"http://purl.obolibrary.org/obo/GO_0007585"},{"id":"T9","span":{"begin":767,"end":778},"obj":"http://purl.obolibrary.org/obo/GO_0045333"},{"id":"T10","span":{"begin":767,"end":778},"obj":"http://purl.obolibrary.org/obo/GO_0007585"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-PD-HP

    {"project":"LitCovid-PD-HP","denotations":[{"id":"T28","span":{"begin":331,"end":349},"obj":"Phenotype"},{"id":"T29","span":{"begin":539,"end":544},"obj":"Phenotype"},{"id":"T30","span":{"begin":555,"end":562},"obj":"Phenotype"},{"id":"T31","span":{"begin":866,"end":871},"obj":"Phenotype"},{"id":"T32","span":{"begin":882,"end":889},"obj":"Phenotype"}],"attributes":[{"id":"A28","pred":"hp_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/HP_0031944"},{"id":"A29","pred":"hp_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A30","pred":"hp_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/HP_0012378"},{"id":"A31","pred":"hp_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/HP_0012378"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T222","span":{"begin":0,"end":42},"obj":"Sentence"},{"id":"T223","span":{"begin":43,"end":57},"obj":"Sentence"},{"id":"T224","span":{"begin":58,"end":77},"obj":"Sentence"},{"id":"T225","span":{"begin":78,"end":130},"obj":"Sentence"},{"id":"T226","span":{"begin":131,"end":170},"obj":"Sentence"},{"id":"T227","span":{"begin":171,"end":236},"obj":"Sentence"},{"id":"T228","span":{"begin":237,"end":277},"obj":"Sentence"},{"id":"T229","span":{"begin":278,"end":306},"obj":"Sentence"},{"id":"T230","span":{"begin":307,"end":328},"obj":"Sentence"},{"id":"T231","span":{"begin":329,"end":355},"obj":"Sentence"},{"id":"T232","span":{"begin":356,"end":404},"obj":"Sentence"},{"id":"T233","span":{"begin":405,"end":419},"obj":"Sentence"},{"id":"T234","span":{"begin":420,"end":438},"obj":"Sentence"},{"id":"T235","span":{"begin":439,"end":460},"obj":"Sentence"},{"id":"T236","span":{"begin":461,"end":481},"obj":"Sentence"},{"id":"T237","span":{"begin":482,"end":503},"obj":"Sentence"},{"id":"T238","span":{"begin":504,"end":536},"obj":"Sentence"},{"id":"T239","span":{"begin":537,"end":552},"obj":"Sentence"},{"id":"T240","span":{"begin":553,"end":568},"obj":"Sentence"},{"id":"T241","span":{"begin":569,"end":604},"obj":"Sentence"},{"id":"T242","span":{"begin":605,"end":621},"obj":"Sentence"},{"id":"T243","span":{"begin":622,"end":640},"obj":"Sentence"},{"id":"T244","span":{"begin":641,"end":693},"obj":"Sentence"},{"id":"T245","span":{"begin":694,"end":715},"obj":"Sentence"},{"id":"T246","span":{"begin":716,"end":764},"obj":"Sentence"},{"id":"T247","span":{"begin":765,"end":786},"obj":"Sentence"},{"id":"T248","span":{"begin":787,"end":808},"obj":"Sentence"},{"id":"T249","span":{"begin":809,"end":830},"obj":"Sentence"},{"id":"T250","span":{"begin":831,"end":863},"obj":"Sentence"},{"id":"T251","span":{"begin":864,"end":879},"obj":"Sentence"},{"id":"T252","span":{"begin":880,"end":897},"obj":"Sentence"},{"id":"T253","span":{"begin":898,"end":933},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Model and individual features Coefficients\nR, n = 8 (41)*\n  Intercept − 0.307\n  Total number of mixed GGO in peripheral area 0.359\n  Total number of consolidation − 1.262\n  Total number of solid nodules with ground-glass opacities 0.452\n  Interlobular septal thickening − 5.559\n  Crazy paving pattern 3.566\n  Tree-in-bud − 2.548\n  Pleural thickening 3.265\n  Offending vessel augmentation in lesions 5.504\nC, n = 7 (26)*\n  Intercept 29.273\n  Respiration − 0.359\n  Heart rate − 0.054\n  Temperature − 0.289\n  White blood cell count − 0.175\n  Cough − 1.866\n  Fatigue 2.855\n  Lymphocyte count category − 0.028\nCR, n = 10 (67)*\n  Intercept 45.117\n  Total number of mixed GGO in peripheral area 0.108\n  Tree-in-bud − 1.853\n  Offending vessel augmentation in lesions 6.000\n  Respiration − 0.583\n  Heart ratio − 0.084\n  Temperature − 0.536\n  White blood cell count − 0.471\n  Cough − 0.997\n  Fatigue − 0.228\n  Lymphocyte count category − 2.177"}