PMC:7156903 / 77-1354
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 1055-1060 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T2 | 1098-1103 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1098-1103 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 115-134 | Disease | denotes | respiratory disease | http://purl.obolibrary.org/obo/MONDO_0005087 |
| T4 | 143-152 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T5 | 358-368 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T6 | 412-420 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T7 | 587-595 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T8 | 913-921 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 83-84 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T2 | 306-309 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T3 | 322-323 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T4 | 497-498 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T5 | 620-625 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T6 | 745-746 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T7 | 837-838 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T8 | 1055-1060 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T9 | 1098-1103 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T10 | 1111-1120 | http://www.ebi.ac.uk/efo/EFO_0000876 | denotes | extremely |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 645-657 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T2 | 653-657 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T3 | 714-726 | Chemical | denotes | nucleic acid | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T4 | 722-726 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-169 | Sentence | denotes | Almost the entire world, not only China, is currently experiencing the outbreak of a novel coronavirus that causes respiratory disease, severe pneumonia, and even death. |
| T4 | 170-257 | Sentence | denotes | The outbreak began in Wuhan, China, in December of 2019 and is currently still ongoing. |
| T5 | 258-475 | Sentence | denotes | This novel coronavirus is highly contagious and has resulted in a continuously increasing number of infections and deaths that have already surpassed the SARS-CoV outbreak that occurred in China between 2002 and 2003. |
| T6 | 476-547 | Sentence | denotes | It is now officially a pandemic, announced by WHO on the 11th of March. |
| T7 | 548-812 | Sentence | denotes | Currently, the 2019 novel coronavirus (SARS-CoV-2) can be identified by virus isolation or viral nucleic acid detection; however, false negatives associated with the nucleic acid detection provide a clinical challenge and thus make the imaging examination crucial. |
| T8 | 813-932 | Sentence | denotes | Imaging exams have been a main clinical diagnostic criteria for the 2019 novel coronavirus disease (COVID-19) in China. |
| T9 | 933-1277 | Sentence | denotes | Imaging features of multiple patchy areas of ground glass opacity and consolidation predominately in the periphery of the lungs are characteristic manifestations on chest CT and extremely helpful in the early detection and diagnosis of this disease, which aids prompt diagnosis and the eventual control of this emerging global health emergency. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T2 | 143-152 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 16 | 85-102 | Species | denotes | novel coronavirus | Tax:2697049 |
| 17 | 263-280 | Species | denotes | novel coronavirus | Tax:2697049 |
| 18 | 412-420 | Species | denotes | SARS-CoV | Tax:694009 |
| 19 | 563-585 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |
| 20 | 587-597 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 21 | 115-134 | Disease | denotes | respiratory disease | MESH:D012140 |
| 22 | 143-152 | Disease | denotes | pneumonia | MESH:D011014 |
| 23 | 163-168 | Disease | denotes | death | MESH:D003643 |
| 24 | 358-368 | Disease | denotes | infections | MESH:D007239 |
| 25 | 373-379 | Disease | denotes | deaths | MESH:D003643 |
| 26 | 881-911 | Disease | denotes | 2019 novel coronavirus disease | MESH:C000657245 |
| 27 | 913-921 | Disease | denotes | COVID-19 | MESH:C000657245 |