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PMC:7156903 / 2292-3765 JSONTXT

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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T10 121-130 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T11 154-163 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T12 203-212 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T13 358-366 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 432-479 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T15 432-465 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T16 482-490 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 580-588 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 683-691 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 783-791 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 981-991 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T21 997-1005 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T22 1044-1052 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T23 1223-1231 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T24 1232-1245 Disease denotes viral disease http://purl.obolibrary.org/obo/MONDO_0005108

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T17 119-120 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 216-217 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 242-247 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T20 326-328 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T21 387-399 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T22 415-420 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T23 540-547 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T24 598-601 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T25 602-603 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 694-697 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T27 711-720 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T28 888-891 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T29 975-980 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T30 1130-1133 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T31 1251-1254 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T32 1275-1278 http://purl.obolibrary.org/obo/CLO_0053001 denotes 114
T33 1378-1379 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 1470-1472 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T17 0-148 Sentence denotes In December of 2019, the city of Wuhan, located in the Hubei province of China, became the epicenter of an outbreak of a pneumonia of unknown cause.
T18 149-236 Sentence denotes This pneumonia was later confirmed to be secondary to infection by a novel coronavirus.
T19 237-555 Sentence denotes This virus was originally called the 2019 novel coronavirus (2019-nCoV), but on February 11, 2020, the disease was named COVID-19 by the World Health Organization (WHO), and the virus was named “severe acute respiratory syndrome coronavirus 2” (SARS-CoV-2) by the International Committee on Taxonomy of Viruses (ICTV).
T20 556-682 Sentence denotes It is believed that the COVID-19 outbreak has a zoonotic origin and began in the Huanan wet seafood wholesale market in Wuhan.
T21 683-773 Sentence denotes SARS-CoV-2 has proven to be extremely contagious and spreads easily from person to person.
T22 774-935 Sentence denotes Cases of COVID-19 have now spread beyond Wuhan to many other provinces in China as well as other countries, which has raised international attention and concern.
T23 936-1088 Sentence denotes As of March 12, 2020, more than 81,000 human infections with SARS-CoV-2 and at least 3100 deaths related to COVID-19 have been confirmed in China alone.
T24 1089-1210 Sentence denotes Although the epidemic situation in China has been relatively under control, the situation outside China is getting worse.
T25 1211-1473 Sentence denotes So far, the COVID-19 viral disease that has swept into at least 114 countries with more than 60,000 cases diagnosed and more than 4000 people killed is now officially a pandemic, as WHO Director-General Tedros Adhanom Ghebreyesus announced in Geneva on March 11.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 121-130 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 154-163 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
57 218-235 Species denotes novel coronavirus Tax:2697049
58 274-296 Species denotes 2019 novel coronavirus Tax:2697049
59 298-307 Species denotes 2019-nCoV Tax:2697049
60 432-479 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
61 482-492 Species denotes SARS-CoV-2 Tax:2697049
62 683-693 Species denotes SARS-CoV-2 Tax:2697049
63 975-980 Species denotes human Tax:9606
64 997-1007 Species denotes SARS-CoV-2 Tax:2697049
65 1346-1352 Species denotes people Tax:9606
66 121-130 Disease denotes pneumonia MESH:D011014
67 154-163 Disease denotes pneumonia MESH:D011014
68 203-212 Disease denotes infection MESH:D007239
69 358-366 Disease denotes COVID-19 MESH:C000657245
70 580-588 Disease denotes COVID-19 MESH:C000657245
71 604-612 Disease denotes zoonotic MESH:D015047
72 783-791 Disease denotes COVID-19 MESH:C000657245
73 981-991 Disease denotes infections MESH:D007239
74 1026-1032 Disease denotes deaths MESH:D003643
75 1044-1052 Disease denotes COVID-19 MESH:C000657245
76 1223-1231 Disease denotes COVID-19 MESH:C000657245
77 1232-1245 Disease denotes viral disease MESH:D001102