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PMC:7156903 / 10176-11546 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T11 0-5 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T12 17-22 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T13 186-191 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T14 506-511 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T15 576-581 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T16 672-676 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T17 772-785 Body_part denotes pleural fluid http://purl.org/sig/ont/fma/fma12273
T18 830-835 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T19 919-924 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T20 1073-1078 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T21 1231-1236 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T22 1288-1292 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T10 0-5 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 17-22 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T12 186-191 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T13 506-511 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T14 672-676 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T15 772-785 Body_part denotes pleural fluid http://purl.obolibrary.org/obo/UBERON_0001087
T16 830-835 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T17 919-924 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T18 1073-1078 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T19 1231-1236 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T20 1288-1292 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T72 37-45 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T73 148-156 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T74 1000-1008 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T82 0-5 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T83 17-22 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T84 186-191 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T85 258-259 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T86 506-511 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T87 576-581 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T88 658-659 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T89 672-676 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T90 672-676 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T91 790-791 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T92 805-808 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T93 830-835 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T94 919-924 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T95 1073-1078 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T96 1231-1236 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T97 1288-1292 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T98 1288-1292 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T99 1366-1368 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T23 1293-1298 Chemical denotes bases http://purl.obolibrary.org/obo/CHEBI_22695

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 406-415 http://purl.obolibrary.org/obo/GO_0006810 denotes transport

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T71 0-16 Sentence denotes Chest radiograph
T72 17-176 Sentence denotes Chest radiograph of COVID-19 is not routinely recommended in clinical practice currently because they are insensitive to detecting COVID-19 in the early stage.
T73 177-455 Sentence denotes However, chest radiography may have some utility, with the potential to serve as a screening tool on the frontlines in medical settings with limited resources or in cases where the patient’s physical condition does not allow for transport to the radiology department CT scanner.
T74 456-582 Sentence denotes As the disease progresses beyond the early stage, chest radiography can detect multiple patchy opacities throughout the lungs.
T75 583-683 Sentence denotes These opacities eventually become confluent and severe cases may appear as a “whited out lung” [15].
T76 684-856 Sentence denotes In more advanced cases, in addition to the ground glass opacity and consolidation, even pleural fluid (in a severe case) has been reported on the chest radiographs [2, 16].
T77 857-978 Sentence denotes Progressive opacities and consolidation have been observed on chest radiographs over the time course of the illness [17].
T78 979-1142 Sentence denotes In the first case of COVID-19 reported in the USA, there were no obvious abnormalities on the chest radiograph during the early stages after the onset of symptoms.
T79 1143-1249 Sentence denotes However, on day 9 of the illness, an increased area left basilar opacity was visible on chest radiography.
T80 1250-1370 Sentence denotes Then, stable streaky opacities in the lung bases were visible, and the opacities have steadily increased over time [18].

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T18 1052-1078 Phenotype denotes abnormalities on the chest http://purl.obolibrary.org/obo/HP_0000765

MyTest

Id Subject Object Predicate Lexical cue
32296940-32007143-29373573 849-850 32007143 denotes 2

0_colil

Id Subject Object Predicate Lexical cue
32296940-32007143-67388 849-850 32007143 denotes 2

TEST0

Id Subject Object Predicate Lexical cue
32296940-165-170-67388 849-850 ["32007143"] denotes 2

2_test

Id Subject Object Predicate Lexical cue
32296940-32007143-29373573 849-850 32007143 denotes 2

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
276 358-365 Species denotes patient Tax:9606
277 37-45 Disease denotes COVID-19 MESH:C000657245
278 148-156 Disease denotes COVID-19 MESH:C000657245
279 1000-1008 Disease denotes COVID-19 MESH:C000657245