PMC:7156291 / 20652-21912
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 388 | 122-137 | Species | denotes | influenza virus | Tax:11309 |
| 389 | 796-813 | Species | denotes | novel coronavirus | Tax:2697049 |
| 390 | 961-972 | Species | denotes | coronavirus | Tax:11118 |
| 391 | 1056-1064 | Species | denotes | patients | Tax:9606 |
| 392 | 1206-1214 | Species | denotes | patients | Tax:9606 |
| 393 | 27-36 | Species | denotes | influenza | Tax:11309 |
| 394 | 149-158 | Disease | denotes | pneumonia | MESH:D011014 |
| 395 | 214-230 | Disease | denotes | Pleural effusion | MESH:D010996 |
| 396 | 268-283 | Disease | denotes | lymphadenopathy | MESH:D008206 |
| 397 | 313-322 | Disease | denotes | pneumonia | MESH:D011014 |
| 398 | 422-430 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 399 | 461-470 | Disease | denotes | pneumonia | MESH:D011014 |
| 400 | 521-531 | Disease | denotes | infections | MESH:D007239 |
| 401 | 612-630 | Disease | denotes | COVID-19 pneumonia | MESH:C000657245 |
| 402 | 711-719 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 403 | 731-746 | Disease | denotes | viral pneumonia |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T38 | 214-230 | Body_part | denotes | Pleural effusion | http://purl.obolibrary.org/obo/UBERON_0000175 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T51 | 27-36 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T52 | 122-131 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T53 | 149-158 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T54 | 268-283 | Disease | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/MONDO_0005833 |
| T55 | 302-322 | Disease | denotes | Organizing pneumonia | http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821 |
| T57 | 313-322 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T58 | 422-430 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T59 | 450-470 | Disease | denotes | organizing pneumonia | http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821 |
| T61 | 461-470 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T62 | 472-474 | Disease | denotes | OP | http://purl.obolibrary.org/obo/MONDO_0015265 |
| T63 | 521-531 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T64 | 612-620 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T65 | 621-630 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T66 | 711-719 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T67 | 731-746 | Disease | denotes | viral pneumonia | http://purl.obolibrary.org/obo/MONDO_0006012 |
| T68 | 737-746 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T113 | 132-137 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T114 | 191-192 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T115 | 214-230 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | Pleural effusion |
| T116 | 302-312 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | Organizing |
| T117 | 323-326 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T118 | 450-460 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organizing |
| T119 | 567-568 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T120 | 632-634 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T121 | 637-638 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T122 | 760-762 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T123 | 780-787 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T124 | 870-874 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T125 | 951-956 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
| T126 | 1082-1083 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T127 | 1152-1159 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T51 | 149-158 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T52 | 214-230 | Phenotype | denotes | Pleural effusion | http://purl.obolibrary.org/obo/HP_0002202 |
| T53 | 268-283 | Phenotype | denotes | lymphadenopathy | http://purl.obolibrary.org/obo/HP_0002716 |
| T54 | 313-322 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T55 | 461-470 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T56 | 621-630 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T57 | 737-746 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
0_colil
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32291502-23857688-66862 | 293-295 | 23857688 | denotes | 14 |
| 32291502-29757717-66863 | 297-299 | 29757717 | denotes | 15 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32291502-79-85-66862 | 293-295 | ["23857688"] | denotes | 14 |
| 32291502-83-89-66863 | 297-299 | ["29757717"] | denotes | 15 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32291502-23857688-29373121 | 293-295 | 23857688 | denotes | 14 |
| 32291502-29757717-29373122 | 297-299 | 29757717 | denotes | 15 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T208 | 0-94 | Sentence | denotes | In areas outside of China, influenza remains significantly more prevalent at the current time. |
| T209 | 95-213 | Sentence | denotes | Common imaging findings of influenza virus–associated pneumonia include GGO, consolidation, and a combination of both. |
| T210 | 214-301 | Sentence | denotes | Pleural effusion, if present, is usually minimal, and lymphadenopathy is rare [14, 15]. |
| T211 | 302-351 | Sentence | denotes | Organizing pneumonia has also been reported [16]. |
| T212 | 352-558 | Sentence | denotes | There are recent publications that have suggested that CT findings of COVID-19 are similar to the organizing pneumonia (OP) pattern observed from post viral or atypical infections and other etiologies [17]. |
| T213 | 559-768 | Sentence | denotes | Despite a study discussing the nonspecific nature of COVID-19 pneumonia [18], a recent publication suggests that radiologists are able to differentiate COVID-19 from other viral pneumonia on CT [5, 6, 18, 19]. |
| T214 | 769-903 | Sentence | denotes | Laboratory testing for the novel coronavirus is time-consuming, and there are reports of shortage of test kits in some locations [20]. |
| T215 | 904-1002 | Sentence | denotes | As we learned increasingly, initial laboratory tests for coronavirus can be falsely negative [20]. |
| T216 | 1003-1260 | Sentence | denotes | Therefore, the presence of suspicious CT findings in patients, correlated with a number of days after symptom onset, should prompt repeat laboratory testing and consideration of respiratory isolation in patients with appropriate travel and exposure history. |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32291502-23857688-29373121 | 293-295 | 23857688 | denotes | 14 |
| 32291502-29757717-29373122 | 297-299 | 29757717 | denotes | 15 |