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PMC:7156291 / 14841-16186 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
278 932-948 Disease denotes Pleural effusion MESH:D010996
279 985-1000 Disease denotes Lymphadenopathy MESH:D008206
282 67-75 Species denotes patients Tax:9606
283 81-89 Disease denotes COVID-19 MESH:C000657245
285 1309-1317 Species denotes patients Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T37 43-47 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T38 1103-1107 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T24 43-47 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T25 932-948 Body_part denotes Pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175
T26 1103-1107 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 81-89 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T42 985-1000 Disease denotes Lymphadenopathy http://purl.obolibrary.org/obo/MONDO_0005833

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T81 43-47 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T82 43-47 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T83 236-238 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T84 932-948 http://purl.obolibrary.org/obo/UBERON_0000175 denotes Pleural effusion
T85 1103-1107 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T86 1103-1107 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T87 1232-1234 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T88 1250-1252 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T29 1132-1134 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T35 271-290 Phenotype denotes Pulmonary opacities http://purl.obolibrary.org/obo/HP_0031457
T36 932-948 Phenotype denotes Pleural effusion http://purl.obolibrary.org/obo/HP_0002202
T37 985-1000 Phenotype denotes Lymphadenopathy http://purl.obolibrary.org/obo/HP_0002716

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T147 0-124 Sentence denotes Table 2 Evolution of CT findings and total lung severity scores of patients with COVID-19 within 21 days after disease onset
T148 125-175 Sentence denotes Characteristic Time after disease onset χ2 p value
T149 176-270 Sentence denotes Days 0–3 (n = 37) Days 4–7 (n = 69) Days 8–10 (n = 53) Days 11–14 (n = 49) Days 15–21 (n = 25)
T150 271-290 Sentence denotes Pulmonary opacities
T151 291-354 Sentence denotes   GGO only 8 (21.6) 13 (18.8) 7 (13.2) 4 (8.2) 1 (4.0) 6.6 0.16
T152 355-436 Sentence denotes   GGO and consolidation 12 (32.4) 26 (37.7) 8 (15.1) 5 (10.1) 1 (4.0) 22.2 < 0.01
T153 437-513 Sentence denotes   GGO and linear opacities 2 (5.4) 2 (2.9) 4 (7.5) 2 (4.1) 2 (8.0) 1.87 0.76
T154 514-584 Sentence denotes   Consolidation only 1 (2.8) 6 (8.7) 3 (5.7) 4 (8.2) 1 (4.0) 1.98 0.74
T155 585-669 Sentence denotes   Consolidation and linear opacities 0 (0) 2 (2.9) 4 (7.5) 4 (8.2) 3 (12.0) 6.0 0.19
T156 670-774 Sentence denotes   GGO, consolidation, and linear opacities 12 (32.4) 19 (27.5) 25 (47.2) 30 (61.2) 17 (68.0) 21.5 < 0.01
T157 775-837 Sentence denotes   Negative CT 2 (5.4) 1 (1.5) 2 (3.8) 0 (0.0) 0 (0.0) 4.3 0.36
T158 838-852 Sentence denotes Other findings
T159 853-929 Sentence denotes   Discrete pulmonary nodules 4 (10.8) 4 (5.8) 3 (5.7) 1 (2.0) 0 (0) 4.8 0.36
T160 930-982 Sentence denotes   Pleural effusion 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) – –
T161 983-1034 Sentence denotes   Lymphadenopathy 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) – –
T162 1035-1096 Sentence denotes   Cavitation 3 (8.1) 3 (4.3) 1 (1.9) 2 (4.1) 1 (4.0) 2.1 0.72
T163 1097-1122 Sentence denotes Total lung severity score
T164 1123-1191 Sentence denotes   Mean ± SD 3.9 ± 2.7 4.8 ± 2.9 4.9 ± 2.8 5.3 ± 3.3 5.2 ± 2.8 – 0.29
T165 1192-1257 Sentence denotes   Median (range) 4 (0–10) 5 (0–12) 5 (0–11) 5 (1–13) 5 (1–11) – –
T166 1258-1296 Sentence denotes Numbers in parentheses are percentages
T167 1297-1345 Sentence denotes n number of patients, GGO ground glass opacities