
PMC:7152911 / 83968-85275
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7152911","sourcedb":"PMC","sourceid":"7152911","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7152911","text":"One of the most critical considerations associated with application of droplet formats to pathogen detection is sampling, specifically if sufficient sampling has been performed on the system for which bioanalytical information is desired (e.g., a human, a food source, or source of drinking water). For example, the rationale that the bioanalytical characteristics of a droplet represent that of the bulk system is sound only in a well-mixed system, specifically, a system that exhibits a uniform spatial distribution of species (i.e., concentration profile). We note that while this is typically the case for samples acquired from closed, convective systems, such as body fluids, it should be challenged when considering open systems that exhibit complex flow profiles or regions of static fluid. For example, groundwater systems (e.g., aquifers), rivers, and lakes have been reported to have complex flow profiles (Ji, 2017; Zhang et al. 1996). Thus, the sampling approach should be considered when examining droplet formats for food and water safety applications. In addition to a consideration of system mixing, one should also consider the potential measurement pitfalls when analyzing samples that contain dilute levels of highly infectious pathogens, such as the potential for false-negative results.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"1525","span":{"begin":247,"end":252},"obj":"Species"},{"id":"1526","span":{"begin":291,"end":296},"obj":"Chemical"},{"id":"1527","span":{"begin":1040,"end":1045},"obj":"Chemical"}],"attributes":[{"id":"A1525","pred":"tao:has_database_id","subj":"1525","obj":"Tax:9606"},{"id":"A1526","pred":"tao:has_database_id","subj":"1526","obj":"MESH:D014867"},{"id":"A1527","pred":"tao:has_database_id","subj":"1527","obj":"MESH:D014867"},{"subj":"1525","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1526","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1527","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T178","span":{"begin":668,"end":679},"obj":"Body_part"},{"id":"T179","span":{"begin":668,"end":672},"obj":"Body_part"}],"attributes":[{"id":"A178","pred":"fma_id","subj":"T178","obj":"http://purl.org/sig/ont/fma/fma280556"},{"id":"A179","pred":"fma_id","subj":"T179","obj":"http://purl.org/sig/ont/fma/fma256135"},{"subj":"T178","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T179","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T74","span":{"begin":1236,"end":1246},"obj":"Disease"}],"attributes":[{"id":"A74","pred":"mondo_id","subj":"T74","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"subj":"T74","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T558","span":{"begin":158,"end":161},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T559","span":{"begin":245,"end":246},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T560","span":{"begin":247,"end":252},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T561","span":{"begin":254,"end":255},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T562","span":{"begin":368,"end":369},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T563","span":{"begin":429,"end":430},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T564","span":{"begin":464,"end":465},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T565","span":{"begin":487,"end":488},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T566","span":{"begin":668,"end":679},"obj":"http://purl.obolibrary.org/obo/UBERON_0006314"},{"id":"T567","span":{"begin":1082,"end":1083},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T558","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T559","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T560","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T561","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T562","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T563","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T564","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T565","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T566","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T567","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T12883","span":{"begin":56,"end":67},"obj":"Chemical"},{"id":"T8969","span":{"begin":291,"end":296},"obj":"Chemical"},{"id":"T27706","span":{"begin":1040,"end":1045},"obj":"Chemical"}],"attributes":[{"id":"A77383","pred":"chebi_id","subj":"T12883","obj":"http://purl.obolibrary.org/obo/CHEBI_33232"},{"id":"A34153","pred":"chebi_id","subj":"T8969","obj":"http://purl.obolibrary.org/obo/CHEBI_15377"},{"id":"A1468","pred":"chebi_id","subj":"T27706","obj":"http://purl.obolibrary.org/obo/CHEBI_15377"},{"subj":"T12883","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T8969","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T27706","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T688","span":{"begin":0,"end":298},"obj":"Sentence"},{"id":"T689","span":{"begin":299,"end":559},"obj":"Sentence"},{"id":"T690","span":{"begin":560,"end":797},"obj":"Sentence"},{"id":"T691","span":{"begin":798,"end":939},"obj":"Sentence"},{"id":"T692","span":{"begin":940,"end":946},"obj":"Sentence"},{"id":"T693","span":{"begin":947,"end":1066},"obj":"Sentence"},{"id":"T694","span":{"begin":1067,"end":1307},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T688","pred":"source","obj":"LitCovid-sentences"},{"subj":"T689","pred":"source","obj":"LitCovid-sentences"},{"subj":"T690","pred":"source","obj":"LitCovid-sentences"},{"subj":"T691","pred":"source","obj":"LitCovid-sentences"},{"subj":"T692","pred":"source","obj":"LitCovid-sentences"},{"subj":"T693","pred":"source","obj":"LitCovid-sentences"},{"subj":"T694","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#df93ec","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93ecc5"},{"id":"LitCovid-PD-MONDO","color":"#ecab93"},{"id":"LitCovid-PD-CLO","color":"#9394ec"},{"id":"LitCovid-PD-CHEBI","color":"#aeec93"},{"id":"LitCovid-sentences","color":"#ec93c8"}]}]}}