PMC:7152911 / 133784-135331 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2015 961-968 Species denotes E. coli Tax:562
2016 600-607 Chemical denotes glycine MESH:D005998
2017 613-617 Chemical denotes urea MESH:D014508
2018 847-854 Chemical denotes acetone MESH:D000096
2019 903-905 Chemical denotes Au MESH:D006046
2020 1064-1081 Chemical denotes hydrogen peroxide MESH:D006861
2021 1021-1028 Disease denotes Johnson MESH:C535882

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T50 600-607 Body_part denotes glycine http://purl.org/sig/ont/fma/fma82753
T51 663-669 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T52 860-866 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T219 42-43 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T220 175-176 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 254-257 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T222 663-669 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T223 821-822 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T224 838-845 http://purl.obolibrary.org/obo/OBI_0100026 denotes organic
T225 838-845 http://purl.obolibrary.org/obo/UBERON_0000468 denotes organic
T226 860-866 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T227 976-983 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T228 1049-1050 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T229 1456-1457 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T97738 555-559 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T30089 560-564 Chemical denotes base http://purl.obolibrary.org/obo/CHEBI_22695
T2572 600-607 Chemical denotes glycine http://purl.obolibrary.org/obo/CHEBI_15428|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_57305
T93186 613-617 Chemical denotes urea http://purl.obolibrary.org/obo/CHEBI_16199
T90680 847-854 Chemical denotes acetone http://purl.obolibrary.org/obo/CHEBI_15347
T48726 903-905 Chemical denotes Au http://purl.obolibrary.org/obo/CHEBI_29287
T27352 1064-1081 Chemical denotes hydrogen peroxide http://purl.obolibrary.org/obo/CHEBI_16240
T67965 1064-1072 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T44570 1073-1081 Chemical denotes peroxide http://purl.obolibrary.org/obo/CHEBI_44785

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T14 193-205 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T15 336-348 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T16 574-586 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T17 649-661 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T18 1121-1133 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration
T19 1334-1346 http://purl.obolibrary.org/obo/GO_0031099 denotes regeneration

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1083 0-123 Sentence denotes The inability to regenerate biosensors is a major hindrance to biosensor-based process monitoring and control applications.
T1084 124-325 Sentence denotes While various biosensors must be disposed of after a single use, the regeneration of biosensor surfaces using chemical approaches has been leveraged as an approach for creating multiple-use biosensors.
T1085 326-521 Sentence denotes Biosensor regeneration approaches typically involve chemically-mediated dissociation of the target from the immobilized biorecognition element or removal of the biorecognition element altogether.
T1086 522-735 Sentence denotes This can be accomplished through acid-base mediated regeneration, detergents, glycine, and urea as well as achieved by thermal regeneration, plasma cleaning, or even direct electrochemical desorption (Goode et al.
T1087 736-754 Sentence denotes 2015; Huang et al.
T1088 755-782 Sentence denotes 2010; Zelada-Guillen et al.
T1089 783-789 Sentence denotes 2010).
T1090 790-1013 Sentence denotes For example, Dweik et al. used a combination of organic (acetone) and plasma cleaning protocols to regenerate an Au interdigitated microelectrode array after detection of E. coli to use devices five times each (Dweik et al.
T1091 1014-1020 Sentence denotes 2012).
T1092 1021-1301 Sentence denotes Johnson and Mutharasan used a liquid-phase hydrogen peroxide-mediated UV-photooxidation process for regeneration of biosensor surfaces as an alternative to aggressive chemical treatments, such as those based on the use of high- or low-pH solutions (Johnson and Mutharasan, 2013b).
T1093 1302-1547 Sentence denotes We note that an ideal biosensor regeneration (i.e., cleaning) approach for process monitoring applications would remove the captured target in situ using a chemical-free approach and preserve the biorecognition layer for subsequent measurements.

2_test

Id Subject Object Predicate Lexical cue
32364936-25402969-7713196 736-740 25402969 denotes 2015
32364936-19932018-7713197 755-759 19932018 denotes 2010
32364936-20961052-7713198 783-787 20961052 denotes 2010
32364936-22608418-7713199 1014-1018 22608418 denotes 2012