
PMC:7152911 / 121163-122452
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7152911","sourcedb":"PMC","sourceid":"7152911","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7152911","text":"The field of medical diagnostics heavily relies on the identification and quantification of pathogens found in body fluids, including whole blood, stool, urine, mucus, saliva, or sputum. Diagnostic assays based on traditional bioanalytical techniques for detection of pathogens in body fluids are the gold standard and serve an essential role in healthcare by enabling the diagnosis and treatment of various diseases. Biosensors offer a complementary diagnostic platform that enable rapid and cost-effective measurements, high sensitivity, and the ability to make measurements in complex matrices that pose challenges to traditional bioanalytical techniques. Studies suggest that rapid diagnostic testing can potentially reduce the chance of hospitalization, duration of hospitalization and antimicrobial use, and mortality rates (Barenfanger et al. 2000; Beekmann et al. 2003; Dierkes et al. 2009; Rappo et al. 2016). For example, repeated rapid screening programs for human immunodeficiency virus (HIV) detection is recommended as a means of increasing quality-adjusted life years of health for citizens in the United States (Paltiel et al. 2006). Additionally, the need for rapid antibody screening has been identified as an important aspect of mitigating the ongoing COVID-19 pandemic.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"1906","span":{"begin":970,"end":998},"obj":"Species"},{"id":"1907","span":{"begin":1000,"end":1003},"obj":"Species"},{"id":"1908","span":{"begin":814,"end":823},"obj":"Disease"},{"id":"1909","span":{"begin":1271,"end":1279},"obj":"Disease"}],"attributes":[{"id":"A1906","pred":"tao:has_database_id","subj":"1906","obj":"Tax:12721"},{"id":"A1907","pred":"tao:has_database_id","subj":"1907","obj":"Tax:12721"},{"id":"A1908","pred":"tao:has_database_id","subj":"1908","obj":"MESH:D003643"},{"id":"A1909","pred":"tao:has_database_id","subj":"1909","obj":"MESH:C000657245"},{"subj":"1906","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1907","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1908","pred":"source","obj":"LitCovid-PubTator"},{"subj":"1909","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T19","span":{"begin":111,"end":122},"obj":"Body_part"},{"id":"T20","span":{"begin":111,"end":115},"obj":"Body_part"},{"id":"T21","span":{"begin":140,"end":145},"obj":"Body_part"},{"id":"T22","span":{"begin":147,"end":152},"obj":"Body_part"},{"id":"T23","span":{"begin":154,"end":159},"obj":"Body_part"},{"id":"T24","span":{"begin":161,"end":166},"obj":"Body_part"},{"id":"T25","span":{"begin":168,"end":174},"obj":"Body_part"},{"id":"T26","span":{"begin":179,"end":185},"obj":"Body_part"},{"id":"T27","span":{"begin":281,"end":292},"obj":"Body_part"},{"id":"T28","span":{"begin":281,"end":285},"obj":"Body_part"},{"id":"T29","span":{"begin":1000,"end":1003},"obj":"Body_part"},{"id":"T30","span":{"begin":1183,"end":1191},"obj":"Body_part"}],"attributes":[{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma280556"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma256135"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma64183"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma12274"},{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma66938"},{"id":"A25","pred":"fma_id","subj":"T25","obj":"http://purl.org/sig/ont/fma/fma59862"},{"id":"A26","pred":"fma_id","subj":"T26","obj":"http://purl.org/sig/ont/fma/fma312401"},{"id":"A27","pred":"fma_id","subj":"T27","obj":"http://purl.org/sig/ont/fma/fma280556"},{"id":"A28","pred":"fma_id","subj":"T28","obj":"http://purl.org/sig/ont/fma/fma256135"},{"id":"A29","pred":"fma_id","subj":"T29","obj":"http://purl.org/sig/ont/fma/fma278683"},{"id":"A30","pred":"fma_id","subj":"T30","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T22","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T23","span":{"begin":140,"end":145},"obj":"Body_part"},{"id":"T24","span":{"begin":147,"end":152},"obj":"Body_part"},{"id":"T25","span":{"begin":154,"end":159},"obj":"Body_part"},{"id":"T26","span":{"begin":161,"end":166},"obj":"Body_part"},{"id":"T27","span":{"begin":168,"end":174},"obj":"Body_part"},{"id":"T28","span":{"begin":179,"end":185},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"uberon_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A24","pred":"uberon_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/UBERON_0001988"},{"id":"A25","pred":"uberon_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/UBERON_0001088"},{"id":"A26","pred":"uberon_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/UBERON_0000912"},{"id":"A27","pred":"uberon_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/UBERON_0001836"},{"id":"A28","pred":"uberon_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T107","span":{"begin":976,"end":992},"obj":"Disease"},{"id":"T108","span":{"begin":1271,"end":1279},"obj":"Disease"}],"attributes":[{"id":"A107","pred":"mondo_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/MONDO_0021094"},{"id":"A108","pred":"mondo_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T107","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T108","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T127","span":{"begin":4,"end":9},"obj":"http://purl.obolibrary.org/obo/UBERON_0007688"},{"id":"T128","span":{"begin":111,"end":122},"obj":"http://purl.obolibrary.org/obo/UBERON_0006314"},{"id":"T129","span":{"begin":134,"end":145},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T130","span":{"begin":134,"end":145},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T131","span":{"begin":281,"end":292},"obj":"http://purl.obolibrary.org/obo/UBERON_0006314"},{"id":"T132","span":{"begin":435,"end":436},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T133","span":{"begin":697,"end":704},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T134","span":{"begin":970,"end":975},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T135","span":{"begin":993,"end":998},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T136","span":{"begin":1033,"end":1034},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T137","span":{"begin":1202,"end":1205},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"}],"attributes":[{"subj":"T127","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T130","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T131","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T132","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T133","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T134","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T135","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T136","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T137","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T6251","span":{"begin":301,"end":305},"obj":"Chemical"},{"id":"T84608","span":{"begin":791,"end":804},"obj":"Chemical"}],"attributes":[{"id":"A30805","pred":"chebi_id","subj":"T6251","obj":"http://purl.obolibrary.org/obo/CHEBI_29287"},{"id":"A45084","pred":"chebi_id","subj":"T6251","obj":"http://purl.obolibrary.org/obo/CHEBI_30050"},{"id":"A51385","pred":"chebi_id","subj":"T84608","obj":"http://purl.obolibrary.org/obo/CHEBI_33281"},{"subj":"T6251","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T84608","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T16","span":{"begin":976,"end":992},"obj":"Phenotype"}],"attributes":[{"id":"A16","pred":"hp_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/HP_0002721"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T980","span":{"begin":0,"end":186},"obj":"Sentence"},{"id":"T981","span":{"begin":187,"end":417},"obj":"Sentence"},{"id":"T982","span":{"begin":418,"end":658},"obj":"Sentence"},{"id":"T983","span":{"begin":659,"end":849},"obj":"Sentence"},{"id":"T984","span":{"begin":850,"end":871},"obj":"Sentence"},{"id":"T985","span":{"begin":872,"end":892},"obj":"Sentence"},{"id":"T986","span":{"begin":893,"end":911},"obj":"Sentence"},{"id":"T987","span":{"begin":912,"end":918},"obj":"Sentence"},{"id":"T988","span":{"begin":919,"end":1142},"obj":"Sentence"},{"id":"T989","span":{"begin":1143,"end":1149},"obj":"Sentence"},{"id":"T990","span":{"begin":1150,"end":1289},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T980","pred":"source","obj":"LitCovid-sentences"},{"subj":"T981","pred":"source","obj":"LitCovid-sentences"},{"subj":"T982","pred":"source","obj":"LitCovid-sentences"},{"subj":"T983","pred":"source","obj":"LitCovid-sentences"},{"subj":"T984","pred":"source","obj":"LitCovid-sentences"},{"subj":"T985","pred":"source","obj":"LitCovid-sentences"},{"subj":"T986","pred":"source","obj":"LitCovid-sentences"},{"subj":"T987","pred":"source","obj":"LitCovid-sentences"},{"subj":"T988","pred":"source","obj":"LitCovid-sentences"},{"subj":"T989","pred":"source","obj":"LitCovid-sentences"},{"subj":"T990","pred":"source","obj":"LitCovid-sentences"}]},{"project":"2_test","denotations":[{"id":"32364936-10921934-7713169","span":{"begin":850,"end":854},"obj":"10921934"},{"id":"32364936-12843051-7713170","span":{"begin":872,"end":876},"obj":"12843051"},{"id":"32364936-19671147-7713171","span":{"begin":893,"end":897},"obj":"19671147"},{"id":"32364936-27225406-7713172","span":{"begin":912,"end":916},"obj":"27225406"},{"id":"32364936-17146064-7713173","span":{"begin":1143,"end":1147},"obj":"17146064"}],"attributes":[{"subj":"32364936-10921934-7713169","pred":"source","obj":"2_test"},{"subj":"32364936-12843051-7713170","pred":"source","obj":"2_test"},{"subj":"32364936-19671147-7713171","pred":"source","obj":"2_test"},{"subj":"32364936-27225406-7713172","pred":"source","obj":"2_test"},{"subj":"32364936-17146064-7713173","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#a993ec","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#96ec93"},{"id":"LitCovid-PD-UBERON","color":"#ec93b0"},{"id":"LitCovid-PD-MONDO","color":"#93caec"},{"id":"LitCovid-PD-CLO","color":"#e4ec93"},{"id":"LitCovid-PD-CHEBI","color":"#d993ec"},{"id":"LitCovid-PD-HP","color":"#93ecbf"},{"id":"LitCovid-sentences","color":"#eca593"},{"id":"2_test","color":"#939aec"}]}]}}