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PMC:7152526 / 771-2002 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
43 28-75 Species denotes severe acute respiratory syndrome coronavirus-2 Tax:2697049
44 77-87 Species denotes SARS-CoV-2 Tax:2697049
45 390-396 Species denotes people Tax:9606
46 420-426 Species denotes people Tax:9606
47 768-776 Species denotes patients Tax:9606
48 981-989 Species denotes patients Tax:9606
49 89-98 Disease denotes infection MESH:D007239
50 245-269 Disease denotes coronavirus disease 2019 MESH:C000657245
51 271-279 Disease denotes COVID-19 MESH:C000657245
52 402-410 Disease denotes infected MESH:D007239
53 629-645 Disease denotes viral infections MESH:D001102
54 663-695 Disease denotes Middle East respiratory syndrome MESH:D018352
55 697-701 Disease denotes MERS MESH:D018352
56 710-723 Disease denotes virus disease MESH:D001102
57 906-914 Disease denotes COVID-19 MESH:C000657245
58 972-980 Disease denotes COVID-19 MESH:C000657245
59 1001-1036 Disease denotes acute respiratory distress syndrome MESH:D012128
60 1038-1042 Disease denotes ARDS MESH:D012128
61 1201-1221 Disease denotes SARS-CoV-2 infection MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T6 604-610 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T7 886-892 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T8 1107-1113 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T9 1176-1182 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T14 28-75 Disease denotes severe acute respiratory syndrome coronavirus-2 http://purl.obolibrary.org/obo/MONDO_0100096
T15 28-61 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T16 77-85 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 89-98 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 245-269 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T19 271-279 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 629-645 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T21 657-661 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 704-723 Disease denotes Ebola virus disease http://purl.obolibrary.org/obo/MONDO_0005737
T23 727-736 Disease denotes avian flu http://purl.obolibrary.org/obo/MONDO_0018695
T24 733-736 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T25 906-914 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T26 972-980 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T27 1001-1036 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T28 1007-1036 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T29 1038-1042 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T30 1201-1209 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 1212-1221 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T9 129-132 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T10 144-145 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 199-211 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 485-490 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T13 604-610 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T14 710-715 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 886-892 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T16 1056-1057 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 1107-1113 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T18 1176-1182 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T2 629-645 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T8 0-12 Sentence denotes INTRODUCTION
T9 13-181 Sentence denotes An outbreak of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) infection, which began in Wuhan, China, has emerged as a primary concern all over the world.
T10 182-354 Sentence denotes The World Health Organization announced the risk assessment of coronavirus disease 2019 (COVID-19) as very high at the global level, and fatal cases are rapidly increasing.
T11 355-448 Sentence denotes By March 24, 2020, more than 9,000 people were infected, and 126 people died, in South Korea.
T12 449-559 Sentence denotes Without specific treatments for the virus, treatment options are being studied in addition to supportive care.
T13 560-935 Sentence denotes Evidence shows that the use of convalescent plasma to treat emerging viral infections, including SARS, Middle East respiratory syndrome (MERS), Ebola virus disease or avian flu, can improve survival rates in patients whose condition worsens even with conventional treatment.12 However, the safety and efficacy of convalescent plasma treatment in COVID-19 have not been known.
T14 936-1123 Sentence denotes Here, we report two cases of severe COVID-19 patients presenting acute respiratory distress syndrome (ARDS), who showed a favorable clinical course after the convalescent plasma infusion.
T15 1124-1231 Sentence denotes This is the first report of the use of convalescent plasma to treat cases of SARS-CoV-2 infection in Korea.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 1007-1027 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T17 28-40 SP_7 denotes severe acute
T18 41-52 SP_7;UBERON:0001004 denotes respiratory
T19 53-75 SP_7 denotes syndrome coronavirus-2
T20 77-87 SP_7 denotes SARS-CoV-2
T21 245-256 NCBITaxon:11118 denotes coronavirus
T22 271-279 SP_7 denotes COVID-19
T23 390-396 NCBITaxon:9606 denotes people
T24 420-426 NCBITaxon:9606 denotes people
T25 427-431 GO:0016265 denotes died
T26 485-490 NCBITaxon:10239 denotes virus
T27 604-610 UBERON:0001969 denotes plasma
T28 629-634 NCBITaxon:10239 denotes viral
T29 657-661 SP_10 denotes SARS
T30 675-686 UBERON:0001004 denotes respiratory
T31 697-701 SP_9 denotes MERS
T32 704-715 NCBITaxon:10376 denotes Ebola virus
T33 727-732 NCBITaxon:8782 denotes avian
T34 886-892 UBERON:0001969 denotes plasma
T35 906-914 SP_7 denotes COVID-19
T36 972-980 SP_7 denotes COVID-19
T37 1007-1018 UBERON:0001004 denotes respiratory
T38 1107-1113 UBERON:0001969 denotes plasma
T39 1176-1182 UBERON:0001969 denotes plasma
T40 1201-1211 SP_7 denotes SARS-CoV-2
T70532 28-40 SP_7 denotes severe acute
T14342 41-52 SP_7;UBERON:0001004 denotes respiratory
T74599 53-75 SP_7 denotes syndrome coronavirus-2
T79195 77-87 SP_7 denotes SARS-CoV-2
T83579 245-256 NCBITaxon:11118 denotes coronavirus
T36882 271-279 SP_7 denotes COVID-19
T55903 390-396 NCBITaxon:9606 denotes people
T47471 420-426 NCBITaxon:9606 denotes people
T15517 427-431 GO:0016265 denotes died
T97192 485-490 NCBITaxon:10239 denotes virus
T99365 604-610 UBERON:0001969 denotes plasma
T77634 629-634 NCBITaxon:10239 denotes viral
T59960 657-661 SP_10 denotes SARS
T84547 675-686 UBERON:0001004 denotes respiratory
T71599 697-701 SP_9 denotes MERS
T80133 704-715 NCBITaxon:10376 denotes Ebola virus
T77082 727-732 NCBITaxon:8782 denotes avian
T63209 886-892 UBERON:0001969 denotes plasma
T69584 906-914 SP_7 denotes COVID-19
T21314 972-980 SP_7 denotes COVID-19
T82774 1007-1018 UBERON:0001004 denotes respiratory
T68959 1107-1113 UBERON:0001969 denotes plasma
T71185 1176-1182 UBERON:0001969 denotes plasma
T71769 1201-1211 SP_7 denotes SARS-CoV-2

2_test

Id Subject Object Predicate Lexical cue
32281317-25030060-61647281 834-835 25030060 denotes 1
32281317-26674811-61647282 834-836 26674811 denotes 12