PMC:7152526 / 2636-3380
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
85 | 343-361 | Gene | denotes | C-reactive protein | Gene:1401 |
86 | 363-366 | Gene | denotes | CRP | Gene:1401 |
87 | 584-597 | Gene | denotes | interleukin 6 | Gene:3569 |
88 | 599-603 | Gene | denotes | IL-6 | Gene:3569 |
89 | 28-35 | Species | denotes | patient | Tax:9606 |
90 | 76-82 | Chemical | denotes | oxygen | MESH:D010100 |
91 | 54-61 | Disease | denotes | dyspnea | MESH:D004417 |
92 | 314-325 | Disease | denotes | lymphopenia | MESH:D008231 |
93 | 474-491 | Disease | denotes | blood coagulation | MESH:D001778 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T12 | 162-167 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
T13 | 244-249 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T14 | 262-278 | Body_part | denotes | white blood cell | http://purl.org/sig/ont/fma/fma62852 |
T15 | 274-278 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T16 | 354-361 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T17 | 474-479 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T18 | 584-597 | Body_part | denotes | interleukin 6 | http://purl.org/sig/ont/fma/fma264829 |
T19 | 584-595 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T3 | 162-167 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T4 | 244-249 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T5 | 268-273 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T6 | 474-479 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T35 | 314-325 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T26 | 162-167 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
T27 | 244-249 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T28 | 244-249 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T29 | 250-255 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
T30 | 268-273 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T31 | 274-278 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T32 | 474-479 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T33 | 474-479 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T34 | 492-497 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tests |
T35 | 584-597 | http://purl.obolibrary.org/obo/PR_000001393 | denotes | interleukin 6 |
T36 | 628-630 | http://purl.obolibrary.org/obo/CLO_0008426 | denotes | pg |
T37 | 718-725 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T7 | 76-82 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
T8 | 354-361 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T9 | 547-556 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
T12 | 599-601 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 474-491 | http://purl.obolibrary.org/obo/GO_0007596 | denotes | blood coagulation |
T6 | 480-491 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T23 | 0-161 | Sentence | denotes | At the time of arrival, the patient had no subjective dyspnea under 4 L/min oxygen flow via nasal cannula, but the respiratory rate was over 30 times per minute. |
T24 | 162-235 | Sentence | denotes | Chest radiographs demonstrated rapidly aggravated bilateral infiltration. |
T25 | 236-342 | Sentence | denotes | Routine blood tests found white blood cell (WBC) count at 3.53 × 103/µL, with lymphopenia of 0.4 × 103/µL. |
T26 | 343-437 | Sentence | denotes | C-reactive protein (CRP) and lactic dehydrogenase (LDH) elevated up to 59.7 mg/L and 814 IU/L. |
T27 | 438-570 | Sentence | denotes | Routine chemistry, electrolyte, and blood coagulation tests revealed no abnormalities except mildly elevated aspartate transaminase. |
T28 | 571-634 | Sentence | denotes | The level of interleukin 6 (IL-6) was increased as 101.3 pg/mL. |
T29 | 635-744 | Sentence | denotes | Serial bacterial culture and polymerase chain reaction (PCR) for other respiratory viruses were all negative. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T7 | 54-61 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
T8 | 314-325 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T52 | 92-97 | UBERON:0000004 | denotes | nasal |
T53 | 115-126 | UBERON:0001004 | denotes | respiratory |
T54 | 244-249 | UBERON:0000178 | denotes | blood |
T55 | 262-267 | CL:0000738 | denotes | white |
T56 | 268-273 | CL:0000738;UBERON:0000178 | denotes | blood |
T57 | 274-278 | CL:0000738 | denotes | cell |
T58 | 343-361 | PR:000005897 | denotes | C-reactive protein |
T59 | 474-479 | UBERON:0000178;GO:0007596 | denotes | blood |
T60 | 480-491 | GO:0007596 | denotes | coagulation |
T61 | 584-597 | PR:000001393 | denotes | interleukin 6 |
T62 | 599-603 | PR:000001393 | denotes | IL-6 |
T63 | 642-651 | NCBITaxon:2 | denotes | bacterial |
T64 | 706-717 | NCBITaxon:11886;UBERON:0001004 | denotes | respiratory |
T65 | 718-725 | NCBITaxon:10239 | denotes | viruses |
T3641 | 92-97 | UBERON:0000004 | denotes | nasal |
T37550 | 115-126 | UBERON:0001004 | denotes | respiratory |
T12571 | 244-249 | UBERON:0000178 | denotes | blood |
T7691 | 262-267 | CL:0000738 | denotes | white |
T67961 | 268-273 | CL:0000738;UBERON:0000178 | denotes | blood |
T4078 | 274-278 | CL:0000738 | denotes | cell |
T33243 | 343-361 | PR:000005897 | denotes | C-reactive protein |
T35856 | 474-479 | UBERON:0000178;GO:0007596 | denotes | blood |
T49965 | 480-491 | GO:0007596 | denotes | coagulation |
T66699 | 584-597 | PR:000001393 | denotes | interleukin 6 |
T70766 | 599-603 | PR:000001393 | denotes | IL-6 |
T46580 | 642-651 | NCBITaxon:2 | denotes | bacterial |
T23228 | 706-717 | NCBITaxon:11886;UBERON:0001004 | denotes | respiratory |
T12091 | 718-725 | NCBITaxon:10239 | denotes | viruses |