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PMC:7152526 / 1942-2642 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
61 30-50 Disease denotes SARS-CoV-2 infection MESH:C000657245
69 246-256 Species denotes SARS-CoV-2 Tax:2697049
70 417-435 Chemical denotes hydroxychloroquine MESH:D006886
71 544-563 Chemical denotes lopinavir/ritonavir MESH:C558899
72 620-626 Chemical denotes oxygen MESH:D010100
73 198-203 Disease denotes fever MESH:D005334
74 208-213 Disease denotes cough MESH:D003371
75 346-354 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T9 5-11 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T10 462-467 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T11 538-542 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 462-467 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T2 538-542 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T30 30-38 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T31 41-50 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T32 246-254 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 346-354 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T34 648-650 Disease denotes he http://purl.obolibrary.org/obo/MONDO_0017319

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T18 5-11 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T19 87-88 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T20 108-110 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T21 172-174 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T22 460-461 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T23 462-467 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T24 538-542 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T25 538-542 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 417-435 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T3 544-563 Chemical denotes lopinavir/ritonavir http://purl.obolibrary.org/obo/CHEBI_145924
T4 544-553 Chemical denotes lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T5 554-563 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T6 620-626 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 271-292 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T4 279-292 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 62-78 Sentence denotes CASE DESCRIPTION
T17 80-86 Sentence denotes Case 1
T18 87-214 Sentence denotes A previously healthy 71-year-old man visited the Community Health Center on February 22, presenting 12 days of fever and cough.
T19 215-355 Sentence denotes He underwent an examination of SARS-CoV-2 via real-time reverse transcription polymerase chain reaction (rRT-PCR) and diagnosed as COVID-19.
T20 356-459 Sentence denotes He admitted to the local public medical center and 400 mg of hydroxychloroquine once daily was started.
T21 460-600 Sentence denotes A chest radiograph obtained on day 2 showed mild opacities in the right lower lung, lopinavir/ritonavir 400 mg/100 mg twice daily was added.
T22 601-693 Sentence denotes However, on day 3, oxygen demand increased, so he transferred to the tertiary-care hospital.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T5 198-203 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T6 208-213 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T39 5-11 UBERON:0001969 denotes plasma
T40 30-40 SP_7 denotes SARS-CoV-2
T41 120-123 NCBITaxon:9606 denotes man
T42 246-256 SP_7 denotes SARS-CoV-2
T43 271-292 GO:0001171 denotes reverse transcription
T44 346-354 SP_7 denotes COVID-19
T45 417-435 CHEBI:5801;DG_20;CHEBI:5801 denotes hydroxychloroquine
T46 462-467 UBERON:0001443 denotes chest
T47 526-531 UBERON:0006518 denotes right
T48 532-537 UBERON:0002168 denotes lower
T49 538-542 UBERON:0002048 denotes lung
T50 544-553 CHEBI:6426;DG_23;CHEBI:6426 denotes lopinavir
T51 554-563 DG_30 denotes ritonavir
T71185 5-11 UBERON:0001969 denotes plasma
T71769 30-40 SP_7 denotes SARS-CoV-2
T21670 120-123 NCBITaxon:9606 denotes man
T90604 246-256 SP_7 denotes SARS-CoV-2
T80731 271-292 GO:0001171 denotes reverse transcription
T945 346-354 SP_7 denotes COVID-19
T75695 417-435 CHEBI:5801;DG_20;CHEBI:5801 denotes hydroxychloroquine
T26119 462-467 UBERON:0001443 denotes chest
T12811 526-531 UBERON:0006518 denotes right
T39085 532-537 UBERON:0002168 denotes lower
T88277 538-542 UBERON:0002048 denotes lung
T67601 544-553 CHEBI:6426;DG_23;CHEBI:6426 denotes lopinavir
T6063 554-563 DG_30 denotes ritonavir