
PMC:7152526 / 1942-2642
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
61 | 30-50 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
69 | 246-256 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
70 | 417-435 | Chemical | denotes | hydroxychloroquine | MESH:D006886 |
71 | 544-563 | Chemical | denotes | lopinavir/ritonavir | MESH:C558899 |
72 | 620-626 | Chemical | denotes | oxygen | MESH:D010100 |
73 | 198-203 | Disease | denotes | fever | MESH:D005334 |
74 | 208-213 | Disease | denotes | cough | MESH:D003371 |
75 | 346-354 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T9 | 5-11 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
T10 | 462-467 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
T11 | 538-542 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 462-467 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T2 | 538-542 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T30 | 30-38 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T31 | 41-50 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T32 | 246-254 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T33 | 346-354 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T34 | 648-650 | Disease | denotes | he | http://purl.obolibrary.org/obo/MONDO_0017319 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18 | 5-11 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T19 | 87-88 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T20 | 108-110 | http://purl.obolibrary.org/obo/CLO_0054055 | denotes | 71 |
T21 | 172-174 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
T22 | 460-461 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T23 | 462-467 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
T24 | 538-542 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T25 | 538-542 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T2 | 417-435 | Chemical | denotes | hydroxychloroquine | http://purl.obolibrary.org/obo/CHEBI_5801 |
T3 | 544-563 | Chemical | denotes | lopinavir/ritonavir | http://purl.obolibrary.org/obo/CHEBI_145924 |
T4 | 544-553 | Chemical | denotes | lopinavir | http://purl.obolibrary.org/obo/CHEBI_31781 |
T5 | 554-563 | Chemical | denotes | ritonavir | http://purl.obolibrary.org/obo/CHEBI_45409 |
T6 | 620-626 | Chemical | denotes | oxygen | http://purl.obolibrary.org/obo/CHEBI_25805 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3 | 271-292 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | reverse transcription |
T4 | 279-292 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16 | 62-78 | Sentence | denotes | CASE DESCRIPTION |
T17 | 80-86 | Sentence | denotes | Case 1 |
T18 | 87-214 | Sentence | denotes | A previously healthy 71-year-old man visited the Community Health Center on February 22, presenting 12 days of fever and cough. |
T19 | 215-355 | Sentence | denotes | He underwent an examination of SARS-CoV-2 via real-time reverse transcription polymerase chain reaction (rRT-PCR) and diagnosed as COVID-19. |
T20 | 356-459 | Sentence | denotes | He admitted to the local public medical center and 400 mg of hydroxychloroquine once daily was started. |
T21 | 460-600 | Sentence | denotes | A chest radiograph obtained on day 2 showed mild opacities in the right lower lung, lopinavir/ritonavir 400 mg/100 mg twice daily was added. |
T22 | 601-693 | Sentence | denotes | However, on day 3, oxygen demand increased, so he transferred to the tertiary-care hospital. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T5 | 198-203 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
T6 | 208-213 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T39 | 5-11 | UBERON:0001969 | denotes | plasma |
T40 | 30-40 | SP_7 | denotes | SARS-CoV-2 |
T41 | 120-123 | NCBITaxon:9606 | denotes | man |
T42 | 246-256 | SP_7 | denotes | SARS-CoV-2 |
T43 | 271-292 | GO:0001171 | denotes | reverse transcription |
T44 | 346-354 | SP_7 | denotes | COVID-19 |
T45 | 417-435 | CHEBI:5801;DG_20;CHEBI:5801 | denotes | hydroxychloroquine |
T46 | 462-467 | UBERON:0001443 | denotes | chest |
T47 | 526-531 | UBERON:0006518 | denotes | right |
T48 | 532-537 | UBERON:0002168 | denotes | lower |
T49 | 538-542 | UBERON:0002048 | denotes | lung |
T50 | 544-553 | CHEBI:6426;DG_23;CHEBI:6426 | denotes | lopinavir |
T51 | 554-563 | DG_30 | denotes | ritonavir |
T71185 | 5-11 | UBERON:0001969 | denotes | plasma |
T71769 | 30-40 | SP_7 | denotes | SARS-CoV-2 |
T21670 | 120-123 | NCBITaxon:9606 | denotes | man |
T90604 | 246-256 | SP_7 | denotes | SARS-CoV-2 |
T80731 | 271-292 | GO:0001171 | denotes | reverse transcription |
T945 | 346-354 | SP_7 | denotes | COVID-19 |
T75695 | 417-435 | CHEBI:5801;DG_20;CHEBI:5801 | denotes | hydroxychloroquine |
T26119 | 462-467 | UBERON:0001443 | denotes | chest |
T12811 | 526-531 | UBERON:0006518 | denotes | right |
T39085 | 532-537 | UBERON:0002168 | denotes | lower |
T88277 | 538-542 | UBERON:0002048 | denotes | lung |
T67601 | 544-553 | CHEBI:6426;DG_23;CHEBI:6426 | denotes | lopinavir |
T6063 | 554-563 | DG_30 | denotes | ritonavir |