
PMC:7148425 / 2531-4900
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7148425","sourcedb":"PMC","sourceid":"7148425","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7148425","text":"COVID immunopathology and potential interventions\nThere is no pre-existing immunity to a virus not previously encountered except via cross-reactivity or shared viral antigen, as is sometimes the case for seasonal influenza strains. As SARS-CoV-2 is almost certainly completely novel for at least the vast majority of people, the virus enjoys unrestrained entry into host cells which then rely on intracellular (cell-intrinsic) anti-viral defence mechanisms [4]. If these fail, cell death releases damage-associated molecules (DAMPs) and viral particles triggering inflammatory reactions. Severe acute respiratory syndrome is caused by dysregulated over-exuberant inflammatory responses that can progress to a systemic sepsis-like “cytokine storm” [5], which together with effects of the virus also directly infecting other organs, not just the lung, can result in multiple organ failure. The aim of prophylactic vaccination of course is to induce sufficient neutralising antibody to prevent infection and sufficient numbers of virus-specific resident memory cytotoxic T cells in the lung to prevent viral replication. This requires the presence and efficient cooperation of antigen-presenting cells, T cells and B cells within a correctly functioning microenvironment (lymph node). When vaccination is unable to elicit qualitatively or quantitatively sufficient protective antibody, host cell infection will still take place, and may trigger sequelae described above. Given the rapidity and degree with which SARS-CoV-2 can cause immunopathology in the lung, vaccines would have to be highly efficient in generating neutralising antibody as well as protective cell mediated local immunity to prevent this sequence of events. Achieving such immune protection by a vaccine is quite feasible in the young, but it may prove to be challenging in old populations as evidenced by the low efficacy of seasonal influenza vaccine in such populations. Alternatively, adoptive immunotherapy with neutralising monoclonal antibody, as in cancer treatment, may be a possibility, and several companies are working on this. However, repeated i.v. infusion of sufficient antibody does not seem a priori an optimal approach. Clearly, traditional vaccination to stimulate the patient’s own response would be preferable, but how likely is it that that could be accomplished in older people?","divisions":[{"label":"title","span":{"begin":0,"end":49}}],"tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"39","span":{"begin":0,"end":21},"obj":"Disease"},{"id":"52","span":{"begin":235,"end":245},"obj":"Species"},{"id":"53","span":{"begin":317,"end":323},"obj":"Species"},{"id":"54","span":{"begin":1509,"end":1519},"obj":"Species"},{"id":"55","span":{"begin":2256,"end":2263},"obj":"Species"},{"id":"56","span":{"begin":2362,"end":2368},"obj":"Species"},{"id":"57","span":{"begin":588,"end":621},"obj":"Disease"},{"id":"58","span":{"begin":718,"end":724},"obj":"Disease"},{"id":"59","span":{"begin":864,"end":886},"obj":"Disease"},{"id":"60","span":{"begin":991,"end":1000},"obj":"Disease"},{"id":"61","span":{"begin":1051,"end":1067},"obj":"Disease"},{"id":"62","span":{"begin":1393,"end":1402},"obj":"Disease"},{"id":"63","span":{"begin":2024,"end":2030},"obj":"Disease"}],"attributes":[{"id":"A39","pred":"tao:has_database_id","subj":"39","obj":"MESH:C000657245"},{"id":"A52","pred":"tao:has_database_id","subj":"52","obj":"Tax:2697049"},{"id":"A53","pred":"tao:has_database_id","subj":"53","obj":"Tax:9606"},{"id":"A54","pred":"tao:has_database_id","subj":"54","obj":"Tax:2697049"},{"id":"A55","pred":"tao:has_database_id","subj":"55","obj":"Tax:9606"},{"id":"A56","pred":"tao:has_database_id","subj":"56","obj":"Tax:9606"},{"id":"A57","pred":"tao:has_database_id","subj":"57","obj":"MESH:D045169"},{"id":"A58","pred":"tao:has_database_id","subj":"58","obj":"MESH:D018805"},{"id":"A59","pred":"tao:has_database_id","subj":"59","obj":"MESH:D009102"},{"id":"A60","pred":"tao:has_database_id","subj":"60","obj":"MESH:D007239"},{"id":"A61","pred":"tao:has_database_id","subj":"61","obj":"MESH:D064420"},{"id":"A62","pred":"tao:has_database_id","subj":"62","obj":"MESH:D007239"},{"id":"A63","pred":"tao:has_database_id","subj":"63","obj":"MESH:D009369"},{"subj":"39","pred":"source","obj":"LitCovid-PubTator"},{"subj":"52","pred":"source","obj":"LitCovid-PubTator"},{"subj":"53","pred":"source","obj":"LitCovid-PubTator"},{"subj":"54","pred":"source","obj":"LitCovid-PubTator"},{"subj":"55","pred":"source","obj":"LitCovid-PubTator"},{"subj":"56","pred":"source","obj":"LitCovid-PubTator"},{"subj":"57","pred":"source","obj":"LitCovid-PubTator"},{"subj":"58","pred":"source","obj":"LitCovid-PubTator"},{"subj":"59","pred":"source","obj":"LitCovid-PubTator"},{"subj":"60","pred":"source","obj":"LitCovid-PubTator"},{"subj":"61","pred":"source","obj":"LitCovid-PubTator"},{"subj":"62","pred":"source","obj":"LitCovid-PubTator"},{"subj":"63","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"2_test","denotations":[{"id":"32300370-26867174-46535322","span":{"begin":458,"end":459},"obj":"26867174"},{"id":"32300370-28466096-46535323","span":{"begin":748,"end":749},"obj":"28466096"},{"id":"T43198","span":{"begin":458,"end":459},"obj":"26867174"},{"id":"T956","span":{"begin":748,"end":749},"obj":"28466096"}],"attributes":[{"subj":"32300370-26867174-46535322","pred":"source","obj":"2_test"},{"subj":"32300370-28466096-46535323","pred":"source","obj":"2_test"},{"subj":"T43198","pred":"source","obj":"2_test"},{"subj":"T956","pred":"source","obj":"2_test"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T27","span":{"begin":89,"end":94},"obj":"NCBITaxon:10239"},{"id":"T28","span":{"begin":160,"end":165},"obj":"NCBITaxon:10239"},{"id":"T29","span":{"begin":166,"end":173},"obj":"CHEBI:59132;CHEBI:59132"},{"id":"T30","span":{"begin":235,"end":245},"obj":"SP_7"},{"id":"T31","span":{"begin":317,"end":323},"obj":"NCBITaxon:9606"},{"id":"T32","span":{"begin":329,"end":334},"obj":"NCBITaxon:10239"},{"id":"T33","span":{"begin":355,"end":365},"obj":"GO:0030260"},{"id":"T34","span":{"begin":396,"end":409},"obj":"GO:0005622"},{"id":"T35","span":{"begin":432,"end":437},"obj":"NCBITaxon:10239"},{"id":"T36","span":{"begin":438,"end":445},"obj":"GO:0006952"},{"id":"T37","span":{"begin":477,"end":487},"obj":"GO:0008219"},{"id":"T38","span":{"begin":515,"end":524},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T39","span":{"begin":526,"end":531},"obj":"CHEBI:51231;CHEBI:51231"},{"id":"T40","span":{"begin":537,"end":542},"obj":"NCBITaxon:10239"},{"id":"T41","span":{"begin":601,"end":612},"obj":"UBERON:0001004"},{"id":"T42","span":{"begin":635,"end":647},"obj":"GO:0065007"},{"id":"T43","span":{"begin":787,"end":792},"obj":"NCBITaxon:10239"},{"id":"T44","span":{"begin":823,"end":829},"obj":"UBERON:0000062"},{"id":"T45","span":{"begin":844,"end":848},"obj":"UBERON:0002048"},{"id":"T46","span":{"begin":873,"end":878},"obj":"UBERON:0000062"},{"id":"T47","span":{"begin":971,"end":979},"obj":"GO:0042571"},{"id":"T48","span":{"begin":1027,"end":1032},"obj":"NCBITaxon:10239"},{"id":"T49","span":{"begin":1051,"end":1057},"obj":"GO:0007613"},{"id":"T50","span":{"begin":1058,"end":1075},"obj":"CL:0000910"},{"id":"T51","span":{"begin":1083,"end":1087},"obj":"UBERON:0002048"},{"id":"T52","span":{"begin":1099,"end":1104},"obj":"NCBITaxon:10239;GO:0006260"},{"id":"T53","span":{"begin":1105,"end":1116},"obj":"GO:0006260"},{"id":"T54","span":{"begin":1174,"end":1181},"obj":"CHEBI:59132;CHEBI:59132"},{"id":"T55","span":{"begin":1200,"end":1207},"obj":"CL:0000084"},{"id":"T56","span":{"begin":1212,"end":1219},"obj":"CL:0000236"},{"id":"T57","span":{"begin":1269,"end":1279},"obj":"UBERON:0000029"},{"id":"T58","span":{"begin":1373,"end":1381},"obj":"GO:0042571"},{"id":"T59","span":{"begin":1509,"end":1519},"obj":"SP_7"},{"id":"T60","span":{"begin":1553,"end":1557},"obj":"UBERON:0002048"},{"id":"T61","span":{"begin":1629,"end":1637},"obj":"GO:0042571"},{"id":"T62","span":{"begin":1740,"end":1746},"obj":"UBERON:0002405"},{"id":"T63","span":{"begin":2008,"end":2016},"obj":"GO:0042571"},{"id":"T64","span":{"begin":2153,"end":2161},"obj":"GO:0042571"},{"id":"T65","span":{"begin":2362,"end":2368},"obj":"NCBITaxon:9606"},{"id":"T54101","span":{"begin":89,"end":94},"obj":"NCBITaxon:10239"},{"id":"T44031","span":{"begin":160,"end":165},"obj":"NCBITaxon:10239"},{"id":"T4383","span":{"begin":166,"end":173},"obj":"CHEBI:59132;CHEBI:59132"},{"id":"T81980","span":{"begin":235,"end":245},"obj":"SP_7"},{"id":"T36640","span":{"begin":317,"end":323},"obj":"NCBITaxon:9606"},{"id":"T54613","span":{"begin":329,"end":334},"obj":"NCBITaxon:10239"},{"id":"T27613","span":{"begin":355,"end":365},"obj":"GO:0030260"},{"id":"T44981","span":{"begin":396,"end":409},"obj":"GO:0005622"},{"id":"T88515","span":{"begin":432,"end":437},"obj":"NCBITaxon:10239"},{"id":"T84065","span":{"begin":438,"end":445},"obj":"GO:0006952"},{"id":"T25786","span":{"begin":477,"end":487},"obj":"GO:0008219"},{"id":"T8397","span":{"begin":515,"end":524},"obj":"CHEBI:36357;CHEBI:36357"},{"id":"T93139","span":{"begin":526,"end":531},"obj":"CHEBI:51231;CHEBI:51231"},{"id":"T92507","span":{"begin":537,"end":542},"obj":"NCBITaxon:10239"},{"id":"T30873","span":{"begin":601,"end":612},"obj":"UBERON:0001004"},{"id":"T73756","span":{"begin":635,"end":647},"obj":"GO:0065007"},{"id":"T7606","span":{"begin":787,"end":792},"obj":"NCBITaxon:10239"},{"id":"T39976","span":{"begin":823,"end":829},"obj":"UBERON:0000062"},{"id":"T67744","span":{"begin":844,"end":848},"obj":"UBERON:0002048"},{"id":"T16617","span":{"begin":873,"end":878},"obj":"UBERON:0000062"},{"id":"T78881","span":{"begin":971,"end":979},"obj":"GO:0042571"},{"id":"T73044","span":{"begin":1027,"end":1032},"obj":"NCBITaxon:10239"},{"id":"T32557","span":{"begin":1051,"end":1057},"obj":"GO:0007613"},{"id":"T56653","span":{"begin":1058,"end":1075},"obj":"CL:0000910"},{"id":"T52969","span":{"begin":1083,"end":1087},"obj":"UBERON:0002048"},{"id":"T98279","span":{"begin":1099,"end":1104},"obj":"NCBITaxon:10239;GO:0006260"},{"id":"T86489","span":{"begin":1105,"end":1116},"obj":"GO:0006260"},{"id":"T90345","span":{"begin":1174,"end":1181},"obj":"CHEBI:59132;CHEBI:59132"},{"id":"T93898","span":{"begin":1200,"end":1207},"obj":"CL:0000084"},{"id":"T24586","span":{"begin":1212,"end":1219},"obj":"CL:0000236"},{"id":"T71351","span":{"begin":1269,"end":1279},"obj":"UBERON:0000029"},{"id":"T89054","span":{"begin":1373,"end":1381},"obj":"GO:0042571"},{"id":"T21969","span":{"begin":1509,"end":1519},"obj":"SP_7"},{"id":"T60923","span":{"begin":1553,"end":1557},"obj":"UBERON:0002048"},{"id":"T37411","span":{"begin":1629,"end":1637},"obj":"GO:0042571"},{"id":"T82134","span":{"begin":1740,"end":1746},"obj":"UBERON:0002405"},{"id":"T5328","span":{"begin":2008,"end":2016},"obj":"GO:0042571"},{"id":"T1265","span":{"begin":2153,"end":2161},"obj":"GO:0042571"},{"id":"T87826","span":{"begin":2362,"end":2368},"obj":"NCBITaxon:9606"}],"attributes":[{"subj":"T27","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T28","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T29","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T30","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T31","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T32","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T33","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T34","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T35","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T36","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T37","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T38","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T39","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T40","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T41","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T42","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T43","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T44","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T45","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T46","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T47","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T48","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T49","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T50","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T51","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T52","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T53","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T54","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T55","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T56","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T57","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T58","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T59","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T60","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T61","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T62","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T63","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T64","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T65","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T54101","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T44031","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T4383","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T81980","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T36640","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T54613","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T27613","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T44981","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T88515","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T84065","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T25786","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T8397","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T93139","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T92507","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T30873","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T73756","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T7606","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T39976","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T67744","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T16617","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T78881","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T73044","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T32557","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T56653","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T52969","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T98279","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T86489","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T90345","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T93898","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T24586","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T71351","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T89054","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T21969","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T60923","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T37411","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T82134","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T5328","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T1265","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T87826","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":371,"end":376},"obj":"Body_part"},{"id":"T3","span":{"begin":411,"end":415},"obj":"Body_part"},{"id":"T4","span":{"begin":477,"end":481},"obj":"Body_part"},{"id":"T5","span":{"begin":731,"end":739},"obj":"Body_part"},{"id":"T6","span":{"begin":844,"end":848},"obj":"Body_part"},{"id":"T7","span":{"begin":873,"end":878},"obj":"Body_part"},{"id":"T8","span":{"begin":971,"end":979},"obj":"Body_part"},{"id":"T9","span":{"begin":1058,"end":1075},"obj":"Body_part"},{"id":"T10","span":{"begin":1070,"end":1075},"obj":"Body_part"},{"id":"T11","span":{"begin":1083,"end":1087},"obj":"Body_part"},{"id":"T12","span":{"begin":1174,"end":1198},"obj":"Body_part"},{"id":"T13","span":{"begin":1193,"end":1198},"obj":"Body_part"},{"id":"T14","span":{"begin":1202,"end":1207},"obj":"Body_part"},{"id":"T15","span":{"begin":1214,"end":1219},"obj":"Body_part"},{"id":"T16","span":{"begin":1269,"end":1279},"obj":"Body_part"},{"id":"T17","span":{"begin":1373,"end":1381},"obj":"Body_part"},{"id":"T18","span":{"begin":1388,"end":1392},"obj":"Body_part"},{"id":"T19","span":{"begin":1553,"end":1557},"obj":"Body_part"},{"id":"T20","span":{"begin":1629,"end":1637},"obj":"Body_part"},{"id":"T21","span":{"begin":1660,"end":1664},"obj":"Body_part"},{"id":"T22","span":{"begin":2008,"end":2016},"obj":"Body_part"},{"id":"T23","span":{"begin":2153,"end":2161},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67498"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma70573"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma273565"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A15","pred":"fma_id","subj":"T15","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A16","pred":"fma_id","subj":"T16","obj":"http://purl.org/sig/ont/fma/fma5034"},{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A18","pred":"fma_id","subj":"T18","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A19","pred":"fma_id","subj":"T19","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A20","pred":"fma_id","subj":"T20","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A21","pred":"fma_id","subj":"T21","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A22","pred":"fma_id","subj":"T22","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A23","pred":"fma_id","subj":"T23","obj":"http://purl.org/sig/ont/fma/fma62871"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T22","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T2","span":{"begin":823,"end":829},"obj":"Body_part"},{"id":"T3","span":{"begin":844,"end":848},"obj":"Body_part"},{"id":"T4","span":{"begin":873,"end":878},"obj":"Body_part"},{"id":"T5","span":{"begin":1083,"end":1087},"obj":"Body_part"},{"id":"T6","span":{"begin":1269,"end":1279},"obj":"Body_part"},{"id":"T7","span":{"begin":1269,"end":1274},"obj":"Body_part"},{"id":"T8","span":{"begin":1553,"end":1557},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000029"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0002391"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T10","span":{"begin":213,"end":222},"obj":"Disease"},{"id":"T11","span":{"begin":235,"end":243},"obj":"Disease"},{"id":"T12","span":{"begin":588,"end":621},"obj":"Disease"},{"id":"T13","span":{"begin":864,"end":886},"obj":"Disease"},{"id":"T14","span":{"begin":991,"end":1000},"obj":"Disease"},{"id":"T15","span":{"begin":1393,"end":1402},"obj":"Disease"},{"id":"T16","span":{"begin":1509,"end":1517},"obj":"Disease"},{"id":"T17","span":{"begin":1902,"end":1911},"obj":"Disease"},{"id":"T18","span":{"begin":2024,"end":2030},"obj":"Disease"}],"attributes":[{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A13","pred":"mondo_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/MONDO_0043726"},{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A18","pred":"mondo_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T11","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T12","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T13","span":{"begin":87,"end":88},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T14","span":{"begin":89,"end":94},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T15","span":{"begin":329,"end":334},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T16","span":{"begin":371,"end":376},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T17","span":{"begin":411,"end":415},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T18","span":{"begin":477,"end":481},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T19","span":{"begin":707,"end":708},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T20","span":{"begin":787,"end":792},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T21","span":{"begin":823,"end":829},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T22","span":{"begin":844,"end":848},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T23","span":{"begin":844,"end":848},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T24","span":{"begin":873,"end":878},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T25","span":{"begin":892,"end":895},"obj":"http://purl.obolibrary.org/obo/PR_000001343"},{"id":"T26","span":{"begin":1027,"end":1032},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T27","span":{"begin":1068,"end":1075},"obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"T28","span":{"begin":1083,"end":1087},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T29","span":{"begin":1083,"end":1087},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T30","span":{"begin":1193,"end":1198},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T31","span":{"begin":1200,"end":1207},"obj":"http://purl.obolibrary.org/obo/CL_0000084"},{"id":"T32","span":{"begin":1212,"end":1219},"obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"T33","span":{"begin":1227,"end":1228},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T34","span":{"begin":1269,"end":1279},"obj":"http://purl.obolibrary.org/obo/UBERON_0000029"},{"id":"T35","span":{"begin":1388,"end":1392},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T36","span":{"begin":1553,"end":1557},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T37","span":{"begin":1553,"end":1557},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T38","span":{"begin":1660,"end":1664},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T39","span":{"begin":1761,"end":1762},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T40","span":{"begin":2049,"end":2050},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T41","span":{"begin":2176,"end":2177},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T13","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T16","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T17","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T18","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T19","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T20","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T21","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T22","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T23","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T26","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T27","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T28","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T29","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T30","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T31","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T32","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T33","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T36","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T37","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T38","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T39","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T40","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T41","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T2","span":{"begin":166,"end":173},"obj":"Chemical"},{"id":"T3","span":{"begin":515,"end":524},"obj":"Chemical"},{"id":"T4","span":{"begin":1174,"end":1181},"obj":"Chemical"}],"attributes":[{"id":"A2","pred":"chebi_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_59132"},{"id":"A3","pred":"chebi_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/CHEBI_25367"},{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_59132"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T3","span":{"begin":355,"end":370},"obj":"http://purl.obolibrary.org/obo/GO_0044409"},{"id":"T4","span":{"begin":477,"end":487},"obj":"http://purl.obolibrary.org/obo/GO_0008219"},{"id":"T5","span":{"begin":663,"end":685},"obj":"http://purl.obolibrary.org/obo/GO_0006954"},{"id":"T6","span":{"begin":1051,"end":1057},"obj":"http://purl.obolibrary.org/obo/GO_0007613"},{"id":"T7","span":{"begin":1099,"end":1116},"obj":"http://purl.obolibrary.org/obo/GO_0019079"},{"id":"T8","span":{"begin":1099,"end":1116},"obj":"http://purl.obolibrary.org/obo/GO_0019058"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T5","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T6","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T15","span":{"begin":0,"end":49},"obj":"Sentence"},{"id":"T16","span":{"begin":50,"end":231},"obj":"Sentence"},{"id":"T17","span":{"begin":232,"end":461},"obj":"Sentence"},{"id":"T18","span":{"begin":462,"end":587},"obj":"Sentence"},{"id":"T19","span":{"begin":588,"end":887},"obj":"Sentence"},{"id":"T20","span":{"begin":888,"end":1117},"obj":"Sentence"},{"id":"T21","span":{"begin":1118,"end":1281},"obj":"Sentence"},{"id":"T22","span":{"begin":1282,"end":1467},"obj":"Sentence"},{"id":"T23","span":{"begin":1468,"end":1724},"obj":"Sentence"},{"id":"T24","span":{"begin":1725,"end":1940},"obj":"Sentence"},{"id":"T25","span":{"begin":1941,"end":2106},"obj":"Sentence"},{"id":"T26","span":{"begin":2107,"end":2205},"obj":"Sentence"},{"id":"T27","span":{"begin":2206,"end":2369},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T15","pred":"source","obj":"LitCovid-sentences"},{"subj":"T16","pred":"source","obj":"LitCovid-sentences"},{"subj":"T17","pred":"source","obj":"LitCovid-sentences"},{"subj":"T18","pred":"source","obj":"LitCovid-sentences"},{"subj":"T19","pred":"source","obj":"LitCovid-sentences"},{"subj":"T20","pred":"source","obj":"LitCovid-sentences"},{"subj":"T21","pred":"source","obj":"LitCovid-sentences"},{"subj":"T22","pred":"source","obj":"LitCovid-sentences"},{"subj":"T23","pred":"source","obj":"LitCovid-sentences"},{"subj":"T24","pred":"source","obj":"LitCovid-sentences"},{"subj":"T25","pred":"source","obj":"LitCovid-sentences"},{"subj":"T26","pred":"source","obj":"LitCovid-sentences"},{"subj":"T27","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T1","span":{"begin":718,"end":724},"obj":"Phenotype"},{"id":"T2","span":{"begin":731,"end":745},"obj":"Phenotype"},{"id":"T3","span":{"begin":2024,"end":2030},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/HP_0100806"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/HP_0033041"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/HP_0002664"},{"subj":"T1","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-HP"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec93bf","default":true},{"id":"2_test","color":"#93d9ec"},{"id":"LitCovid-PMC-OGER-BB","color":"#ece593"},{"id":"LitCovid-PD-FMA-UBERON","color":"#cb93ec"},{"id":"LitCovid-PD-UBERON","color":"#93ecb1"},{"id":"LitCovid-PD-MONDO","color":"#ec9793"},{"id":"LitCovid-PD-CLO","color":"#93a8ec"},{"id":"LitCovid-PD-CHEBI","color":"#c2ec93"},{"id":"LitCovid-PD-GO-BP","color":"#ec93dc"},{"id":"LitCovid-sentences","color":"#93ece1"},{"id":"LitCovid-PD-HP","color":"#ecc793"}]}]}}