PMC:7143804 / 47755-48386 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T91","span":{"begin":241,"end":246},"obj":"Body_part"},{"id":"T92","span":{"begin":248,"end":253},"obj":"Body_part"},{"id":"T93","span":{"begin":255,"end":261},"obj":"Body_part"},{"id":"T94","span":{"begin":302,"end":307},"obj":"Body_part"},{"id":"T95","span":{"begin":318,"end":321},"obj":"Body_part"},{"id":"T96","span":{"begin":380,"end":384},"obj":"Body_part"},{"id":"T97","span":{"begin":415,"end":418},"obj":"Body_part"}],"attributes":[{"id":"A91","pred":"fma_id","subj":"T91","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A92","pred":"fma_id","subj":"T92","obj":"http://purl.org/sig/ont/fma/fma66938"},{"id":"A93","pred":"fma_id","subj":"T93","obj":"http://purl.org/sig/ont/fma/fma59862"},{"id":"A94","pred":"fma_id","subj":"T94","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A95","pred":"fma_id","subj":"T95","obj":"http://purl.org/sig/ont/fma/fma74412"},{"id":"A96","pred":"fma_id","subj":"T96","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A97","pred":"fma_id","subj":"T97","obj":"http://purl.org/sig/ont/fma/fma74412"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T14","span":{"begin":241,"end":246},"obj":"Body_part"},{"id":"T15","span":{"begin":248,"end":253},"obj":"Body_part"},{"id":"T16","span":{"begin":255,"end":261},"obj":"Body_part"},{"id":"T17","span":{"begin":447,"end":460},"obj":"Body_part"}],"attributes":[{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0000912"},{"id":"A16","pred":"uberon_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/UBERON_0001836"},{"id":"A17","pred":"uberon_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/UBERON_0006314"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T331","span":{"begin":20,"end":23},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T332","span":{"begin":92,"end":95},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T333","span":{"begin":241,"end":246},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T334","span":{"begin":241,"end":246},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T335","span":{"begin":302,"end":307},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T336","span":{"begin":380,"end":384},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T337","span":{"begin":447,"end":460},"obj":"http://purl.obolibrary.org/obo/UBERON_0006314"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T320","span":{"begin":318,"end":321},"obj":"Chemical"},{"id":"T321","span":{"begin":415,"end":418},"obj":"Chemical"},{"id":"T322","span":{"begin":466,"end":474},"obj":"Chemical"},{"id":"T323","span":{"begin":569,"end":572},"obj":"Chemical"},{"id":"T324","span":{"begin":582,"end":585},"obj":"Chemical"}],"attributes":[{"id":"A320","pred":"chebi_id","subj":"T320","obj":"http://purl.obolibrary.org/obo/CHEBI_16991"},{"id":"A321","pred":"chebi_id","subj":"T321","obj":"http://purl.obolibrary.org/obo/CHEBI_16991"},{"id":"A322","pred":"chebi_id","subj":"T322","obj":"http://purl.obolibrary.org/obo/CHEBI_33893"},{"id":"A323","pred":"chebi_id","subj":"T323","obj":"http://purl.obolibrary.org/obo/CHEBI_566274"},{"id":"A324","pred":"chebi_id","subj":"T324","obj":"http://purl.obolibrary.org/obo/CHEBI_17314"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T24","span":{"begin":385,"end":390},"obj":"http://purl.obolibrary.org/obo/GO_0019835"},{"id":"T25","span":{"begin":495,"end":500},"obj":"http://purl.obolibrary.org/obo/GO_0019835"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"LitCovid-sentences","denotations":[{"id":"T372","span":{"begin":0,"end":87},"obj":"Sentence"},{"id":"T373","span":{"begin":88,"end":269},"obj":"Sentence"},{"id":"T374","span":{"begin":270,"end":337},"obj":"Sentence"},{"id":"T375","span":{"begin":338,"end":424},"obj":"Sentence"},{"id":"T376","span":{"begin":425,"end":559},"obj":"Sentence"},{"id":"T377","span":{"begin":560,"end":631},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}

{"project":"2_test","denotations":[{"id":"32106462-9327537-69893333","span":{"begin":555,"end":557},"obj":"9327537"},{"id":"32106462-11959976-69893334","span":{"begin":574,"end":576},"obj":"11959976"},{"id":"32106462-15247927-69893335","span":{"begin":587,"end":588},"obj":"15247927"}],"text":"The third step that has to be optimized in the sample collection and work-up procedure. One has to think of what kind of samples to collect in order to have the biggest chance of having the agent of the disease present in that sample (i.e., blood, mucus, saliva, etc.). Such crude samples contain full cells, with the DNA present within. There are different approaches to perform cell lysis in order to extract the DNA [78]. Various components of bodily fluids, and reagents and products of the lysis are well-known to inhibit the amplification reaction [79]. However, MDA [80] and HDA [9] could also be performed on crude samples."}