PMC:7143804 / 2613-3447
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 63 | 612-620 | Gene | denotes | helicase | Gene:164045 |
| 64 | 137-142 | Species | denotes | human | Tax:9606 |
| 65 | 128-136 | Disease | denotes | infected | MESH:D007239 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T4 | 287-308 | Body_part | denotes | deoxyribonucleic acid | http://purl.org/sig/ont/fma/fma74412 |
| T5 | 310-313 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T6 | 339-342 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T7 | 346-362 | Body_part | denotes | ribonucleic acid | http://purl.org/sig/ont/fma/fma67095 |
| T8 | 364-367 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T9 | 529-532 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T10 | 536-539 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T11 | 737-740 | Body_part | denotes | DNA | http://purl.org/sig/ont/fma/fma74412 |
| T12 | 744-747 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 137-142 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T24 | 146-152 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animal |
| T25 | 326-334 | http://purl.obolibrary.org/obo/NCBITaxon_2 | denotes | bacteria |
| T26 | 380-387 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T27 | 395-396 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T28 | 709-711 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T29 | 723-724 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T30 | 769-770 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T31 | 799-800 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T6 | 287-308 | Chemical | denotes | deoxyribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T7 | 304-308 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T8 | 310-313 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T9 | 339-342 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T10 | 346-362 | Chemical | denotes | ribonucleic acid | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T11 | 358-362 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T12 | 364-367 | Chemical | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T13 | 529-532 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T14 | 536-539 | Chemical | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T15 | 646-649 | Chemical | denotes | HDA | http://purl.obolibrary.org/obo/CHEBI_17314 |
| T16 | 737-740 | Chemical | denotes | DNA | http://purl.obolibrary.org/obo/CHEBI_16991 |
| T17 | 744-747 | Chemical | denotes | RNA | http://purl.obolibrary.org/obo/CHEBI_33697 |
| T18 | 756-759 | Chemical | denotes | dye | http://purl.obolibrary.org/obo/CHEBI_37958 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25 | 0-188 | Sentence | denotes | In the early stage of diseases, the agent, and therefore its genetic material, is only present in low concentrations within the infected human or animal, making detection rather difficult. |
| T26 | 189-472 | Sentence | denotes | One way to overcome this low concentration is to amplify the genetic material of the agent, i.e., deoxyribonucleic acid (DNA) in case of bacteria and DNA or ribonucleic acid (RNA) in case of viruses, until a certain threshold is reached and detection of the disease is made possible. |
| T27 | 473-834 | Sentence | denotes | When this amplification reaction is specific to certain DNA or RNA sequences, for example, by using polymerase chain reaction (PCR) [6,8], helicase-dependent amplification (HDA) [9,10], or loop-mediated isothermal amplification (LAMP) [11], and when a fluorescent DNA or RNA binding dye is used, a simple yes-or-no answer for a specific disease can be obtained. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32106462-14522060-69893270 | 606-607 | 14522060 | denotes | 6 |
| 32106462-2999980-69893271 | 608-609 | 2999980 | denotes | 8 |
| 32106462-15247927-69893272 | 652-653 | 15247927 | denotes | 9 |
| 32106462-21157218-69893273 | 709-711 | 21157218 | denotes | 11 |