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PMC:7143707 / 90-2565 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
3 2170-2181 Species denotes Coronavirus Tax:11118
6 2440-2455 Chemical denotes isoamyl acetate MESH:C020377
7 2457-2467 Chemical denotes saccharine
21 338-344 Species denotes humans Tax:9606
22 569-587 Species denotes novel corona virus Tax:2697049
23 601-611 Species denotes SARS-CoV-2 Tax:2697049
24 640-650 Species denotes SARS virus Tax:694009
25 750-754 Species denotes cats Tax:9685
26 774-780 Species denotes humans Tax:9606
27 796-808 Species denotes corona virus Tax:11118
28 838-844 Species denotes camels Tax:9837
29 865-886 Species denotes coronavirus/2019-nCoV Tax:2697049
30 1611-1616 Species denotes Ebola Tax:1570291
31 1933-1939 Species denotes people Tax:9606
32 2084-2105 Species denotes coronavirus/2019-ncov Tax:2697049
33 26-48 Disease denotes corona virus infection MESH:C000657245

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T2 33-48 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T3 39-48 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T4 261-273 Disease denotes common colds http://purl.obolibrary.org/obo/MONDO_0005709
T5 601-609 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 640-644 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T7 905-914 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 929-937 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 984-992 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 993-1002 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T11 1153-1161 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 1611-1616 Disease denotes Ebola http://purl.obolibrary.org/obo/MONDO_0005737
T13 1829-1838 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T14 1923-1927 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T15 1968-1977 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 18-19 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 33-38 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T3 117-118 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 160-166 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T5 187-194 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T6 199-200 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 216-223 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T8 327-334 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T9 338-344 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T10 449-450 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 504-509 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T12 582-587 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T13 645-650 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T14 774-780 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T15 803-808 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T16 838-844 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camels
T17 950-951 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 1222-1223 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 2138-2141 http://purl.obolibrary.org/obo/CLO_0001302 denotes 3 4
T20 2144-2148 http://purl.obolibrary.org/obo/CLO_0001326 denotes 3a 5
T21 2155-2159 http://purl.obolibrary.org/obo/CLO_0053815 denotes 4a 7
T22 2183-2186 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T23 2259-2262 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T24 2288-2289 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 2347-2351 http://purl.obolibrary.org/obo/NCBITaxon_8839 denotes duck
T26 2395-2402 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 26-32 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409
T2 402-410 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T3 435-441 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409
T4 575-581 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409
T5 796-802 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409
T6 2440-2455 Chemical denotes isoamyl acetate http://purl.obolibrary.org/obo/CHEBI_31725
T7 2448-2455 Chemical denotes acetate http://purl.obolibrary.org/obo/CHEBI_30089|http://purl.obolibrary.org/obo/CHEBI_47622

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 2290-2296 Phenotype denotes sneeze http://purl.obolibrary.org/obo/HP_0025095

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T3 0-94 Sentence denotes In December 2019, a novel corona virus infection was detected in Wuhan, China, Hubei province.
T4 95-179 Sentence denotes Initial cases all had a common link to an large seafood and live animal marketplace.
T5 180-345 Sentence denotes Corona viruses are a broad class of viruses that are responsible for most of the common colds, as well as several viral illnesses transmitted from animals to humans.
T6 346-499 Sentence denotes They are so-named due to their similar appearance under electron microscopy to the sun's corona during a total solar eclipse (see Fig. 1, Fig. 2 1 , 2 ).
T7 500-900 Sentence denotes The virus responsible for the current outbreak was originally called novel corona virus, now renamed SARS-CoV-2, since it is related to the SARS virus that caused an epidemic in China in 2002-2003 (postulated at that time to have originated in civet cats and then jumped to humans , and the MERS corona virus-related to transmission from camels https://www.cdc.gov/coronavirus/2019-nCoV/summary.html.
T8 901-1115 Sentence denotes The infection is now called COVID-19, and within a few weeks, it became clear that COVID-19 infection was easily spread from person to person, as there was an exponential rise in newly-reported cases seen in China.
T9 1116-1270 Sentence denotes Travelers from China then spread the COVID-19 to other countries, causing the WHO to declare the epidemic a Global Health Emergency on January 30, 20203 .
T10 1271-1642 Sentence denotes Simple recommendations of respiratory protection and glove use early on in the official guidance from health agencies contrasted sharply with wide coverage in the 24-hour news media, showing graphic pictures of civilian authorities and health care personnel in Asian countries wearing extensive protective gear reminiscent of that used for Ebola or even hazmat incidents.
T11 1643-2162 Sentence denotes While initially it was felt that droplet transmission was most the likely mode, recommendations have been upgraded to airborne and contact transmission, since the natural course of this infection is still not completely understood, infectivity or contagiousness seems higher than SARS, and people seem to be able to transmit infection before they ever become symptomatic, and for some days after seemingly full recovery (https://www.cdc.gov/coronavirus/2019-ncov/about/transmission.html) (Figs. 3 4 , 3a 5 , 6 , 4a 7 ).
T12 2163-2187 Sentence denotes Fig. 1 Coronavirus- CDC.
T13 2188-2200 Sentence denotes Fig. 2 NASA:
T14 2201-2251 Sentence denotes Sun's Corona during Solar Eclipse August 21, 2017.
T15 2252-2297 Sentence denotes Fig. 3 CDC- airborne particles from a sneeze.
T16 2298-2382 Sentence denotes Fig. 3a NIOSH- Approved N95 mask (above) and N95 duck bill and other styles (below).
T17 2383-2475 Sentence denotes Fig. 4a fit testing N95 mask with qualitative solutions (isoamyl acetate, saccharine, etc.).

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T2 26-32 NCBITaxon:11118 denotes corona
T3 33-38 NCBITaxon:10239 denotes virus
T4 160-166 NCBITaxon:33208 denotes animal
T5 180-186 NCBITaxon:11118 denotes Corona
T6 187-194 NCBITaxon:10239 denotes viruses
T7 216-223 NCBITaxon:10239 denotes viruses
T8 294-299 NCBITaxon:10239 denotes viral
T9 327-334 NCBITaxon:33208 denotes animals
T10 338-344 NCBITaxon:9606 denotes humans
T11 402-410 CHEBI:10545;CHEBI:10545 denotes electron
T12 504-509 NCBITaxon:10239 denotes virus
T13 575-581 NCBITaxon:11118 denotes corona
T14 582-587 NCBITaxon:10239 denotes virus
T15 601-611 SP_7 denotes SARS-CoV-2
T16 640-650 NCBITaxon:10633 denotes SARS virus
T17 750-754 NCBITaxon:9685 denotes cats
T18 774-780 NCBITaxon:9606 denotes humans
T19 791-795 SP_9 denotes MERS
T20 796-808 NCBITaxon:11118 denotes corona virus
T21 865-876 NCBITaxon:11118 denotes coronavirus
T22 877-886 SP_7 denotes 2019-nCoV
T23 929-937 SP_7 denotes COVID-19
T24 984-992 SP_7 denotes COVID-19
T25 1026-1032 NCBITaxon:9606 denotes person
T26 1036-1042 NCBITaxon:9606 denotes person
T27 1153-1161 SP_7 denotes COVID-19
T28 1297-1308 UBERON:0001004 denotes respiratory
T29 1923-1927 SP_10 denotes SARS
T30 1933-1939 NCBITaxon:9606 denotes people
T31 2084-2095 NCBITaxon:11118 denotes coronavirus
T32 2096-2105 SP_7 denotes 2019-ncov
T33 2347-2351 NCBITaxon:8839 denotes duck
T34 2429-2438 CHEBI:75958;CHEBI:75958 denotes solutions
T35 2440-2455 CHEBI:31725;CHEBI:31725 denotes isoamyl acetate
T61955 26-32 NCBITaxon:11118 denotes corona
T87651 33-38 NCBITaxon:10239 denotes virus
T21378 160-166 NCBITaxon:33208 denotes animal
T49188 180-186 NCBITaxon:11118 denotes Corona
T12149 187-194 NCBITaxon:10239 denotes viruses
T32614 216-223 NCBITaxon:10239 denotes viruses
T8520 294-299 NCBITaxon:10239 denotes viral
T28588 327-334 NCBITaxon:33208 denotes animals
T48155 338-344 NCBITaxon:9606 denotes humans
T32365 402-410 CHEBI:10545;CHEBI:10545 denotes electron
T65557 504-509 NCBITaxon:10239 denotes virus
T24494 575-581 NCBITaxon:11118 denotes corona
T62529 582-587 NCBITaxon:10239 denotes virus
T6785 601-611 SP_7 denotes SARS-CoV-2
T12656 640-650 NCBITaxon:10633 denotes SARS virus
T86164 750-754 NCBITaxon:9685 denotes cats
T50402 774-780 NCBITaxon:9606 denotes humans
T41405 791-795 SP_9 denotes MERS
T49909 796-808 NCBITaxon:11118 denotes corona virus
T27047 865-876 NCBITaxon:11118 denotes coronavirus
T19418 877-886 SP_7 denotes 2019-nCoV
T67563 929-937 SP_7 denotes COVID-19
T62143 984-992 SP_7 denotes COVID-19
T31466 1026-1032 NCBITaxon:9606 denotes person
T72597 1036-1042 NCBITaxon:9606 denotes person
T57301 1153-1161 SP_7 denotes COVID-19
T75341 1297-1308 UBERON:0001004 denotes respiratory
T68613 1923-1927 SP_10 denotes SARS
T64482 1933-1939 NCBITaxon:9606 denotes people
T68712 2084-2095 NCBITaxon:11118 denotes coronavirus
T62123 2096-2105 SP_7 denotes 2019-ncov
T25846 2347-2351 NCBITaxon:8839 denotes duck
T57704 2429-2438 CHEBI:75958;CHEBI:75958 denotes solutions
T12546 2440-2455 CHEBI:31725;CHEBI:31725 denotes isoamyl acetate